Variant report

Variant	rs4849126
Chromosome Location	chr2:113601468-113601469
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10192907	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1143630	1.00[CEU][hapmap];0.91[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11884436	0.89[EUR][1000 genomes]
rs17042498	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs17042509	0.83[EUR][1000 genomes]
rs17042517	0.89[EUR][1000 genomes]
rs2708915	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2708930	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2723157	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2723158	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4369864	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4439960	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4547538	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4619621	0.89[AMR][1000 genomes]
rs4849127	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56100202	0.98[EUR][1000 genomes]
rs57799055	0.89[EUR][1000 genomes]
rs6542102	0.89[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113598200-113603400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr2:113600400-113603400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr2:113600800-113603800	Weak transcription	GM12878-XiMat	blood
4	chr2:113601400-113602000	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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