Variant report

Variant	rs2730814
Chromosome Location	chr12:41870871-41870872
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 186 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:184)

rs_ID	r²[population]
rs1026462	0.81[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs1026464	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10506191	0.81[JPT][hapmap]
rs10506192	0.81[JPT][hapmap]
rs10735993	0.86[ASN][1000 genomes]
rs10785235	0.90[JPT][hapmap]
rs10785258	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs10785261	0.82[CHB][hapmap];0.84[CHD][hapmap];0.90[JPT][hapmap]
rs10785265	0.81[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10880063	0.81[JPT][hapmap]
rs10880067	0.81[JPT][hapmap]
rs10880075	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10880076	0.86[CEU][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11180834	0.80[JPT][hapmap]
rs11180851	0.81[JPT][hapmap]
rs11180863	0.81[JPT][hapmap]
rs11180864	0.81[JPT][hapmap]
rs11180934	0.96[CEU][hapmap]
rs11180999	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs11181001	0.81[CEU][hapmap]
rs1155220	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1160183	0.87[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1160184	0.83[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1160748	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1160749	0.81[CEU][hapmap];0.91[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11835941	0.80[CHB][hapmap];0.90[JPT][hapmap]
rs12314238	0.82[EUR][1000 genomes]
rs12817575	0.81[JPT][hapmap]
rs1350429	0.85[CEU][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1350430	0.81[GIH][hapmap];0.91[MEX][hapmap];0.84[EUR][1000 genomes]
rs1379758	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1379759	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1379760	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1379761	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1379763	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1379764	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1379768	0.81[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1379769	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1379770	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1379771	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1379772	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1379773	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1379774	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1379776	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1405552	0.81[JPT][hapmap]
rs1458156	0.92[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.98[TSI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1458157	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1458158	0.92[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1458159	0.92[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1458160	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1458165	0.81[CEU][hapmap];0.91[MEX][hapmap]
rs1458166	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1458167	0.93[GIH][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1458168	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1471161	0.81[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1471162	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1471163	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1527090	0.81[JPT][hapmap]
rs1551593	0.84[CEU][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1551595	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1551596	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1598894	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1841025	0.84[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1870285	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1870286	0.89[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1902906	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1902911	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs2034923	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2125286	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2125287	0.95[CEU][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2199028	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2250003	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2250009	0.85[CEU][hapmap];0.93[GIH][hapmap];0.92[LWK][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.93[TSI][hapmap];0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2250908	0.81[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2251259	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2251349	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2251672	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2251683	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2251684	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2253528	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2253633	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2253634	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2255035	0.92[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2255145	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2255152	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2255404	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2256412	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2264905	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2405919	0.89[CEU][hapmap]
rs2405920	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2405921	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2446143	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2446144	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2468310	0.89[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2468314	0.96[CEU][hapmap];0.84[YRI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2468315	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2468316	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2468317	0.88[CEU][hapmap];0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2608689	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2608690	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2608691	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608692	0.89[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608696	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608697	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608701	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2608702	0.91[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2608703	0.85[EUR][1000 genomes]
rs2608704	0.92[CEU][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608705	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608706	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2608707	0.92[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2608708	0.89[CEU][hapmap];0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2608710	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2608711	0.84[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2608714	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2608715	0.96[CEU][hapmap];0.91[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2608716	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2608718	0.88[CEU][hapmap];0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2710264	0.92[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2730802	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2730803	0.92[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.98[TSI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2730804	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2730805	0.92[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2730807	0.96[CEU][hapmap];0.88[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2730809	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730810	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2730811	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730817	0.81[CEU][hapmap];0.93[GIH][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730818	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2730819	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730820	0.80[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730821	0.82[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730822	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730824	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2730827	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2730828	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2730829	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730830	0.85[ASW][hapmap];0.81[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2733269	1.00[ASW][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.92[MEX][hapmap];0.88[MKK][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2733274	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2733275	0.80[CEU][hapmap];0.91[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2733276	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2733278	0.92[CEU][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2733280	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2733282	0.81[CEU][hapmap];0.93[GIH][hapmap];0.87[MEX][hapmap];0.89[TSI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2733284	0.89[EUR][1000 genomes]
rs2733285	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2733287	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2733289	0.81[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2733290	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2733291	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2733292	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2733293	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2733297	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2733298	0.89[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2733299	0.88[CEU][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs285556	0.89[CEU][hapmap];0.84[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[EUR][1000 genomes]
rs285560	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs285575	0.88[CEU][hapmap];0.84[GIH][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes]
rs285590	0.89[CEU][hapmap];0.82[GIH][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes]
rs285592	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs285593	0.89[CEU][hapmap];0.84[GIH][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes]
rs285595	0.89[CEU][hapmap];0.84[GIH][hapmap];0.83[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes]
rs2897268	0.81[JPT][hapmap]
rs2957590	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35766123	0.82[EUR][1000 genomes]
rs437178	0.86[EUR][1000 genomes]
rs4584644	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4768353	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4768354	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7298808	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7954518	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs7960955	0.81[CHB][hapmap];0.91[JPT][hapmap]
rs7963312	0.81[JPT][hapmap]
rs7966732	0.82[CHB][hapmap];0.82[CHD][hapmap];0.91[JPT][hapmap]
rs7977318	0.89[CEU][hapmap]
rs897973	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs930905	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs961337	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs971998	0.82[EUR][1000 genomes]
rs981012	0.81[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs981014	0.81[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs989904	0.81[CEU][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs996356	0.81[CEU][hapmap];0.93[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832384	chr12:41772648-41971430	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3337301	chr12:41851654-42093677	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2730814	PDZRN4	cis	parietal	SCAN

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41868000-41871200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr12:41869400-41871200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr12:41869600-41871400	Enhancers	H1 Cell Line	embryonic stem cell
4	chr12:41869600-41871400	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr12:41869600-41871600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr12:41869600-41905200	Weak transcription	Colon Smooth Muscle	Colon
7	chr12:41869800-41871200	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr12:41869800-41871400	Enhancers	H9 Cell Line	embryonic stem cell
9	chr12:41870000-41871200	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr12:41870000-41871400	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr12:41870200-41871000	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr12:41870200-41871200	Enhancers	Fetal Brain Female	brain
13	chr12:41870200-41871400	Enhancers	Brain Angular Gyrus	brain
14	chr12:41870400-41871000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr12:41870400-41871200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr12:41870400-41871200	Enhancers	Cortex derived primary cultured neurospheres	brain
17	chr12:41870400-41871400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr12:41870400-41871400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr12:41870400-41871400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr12:41870600-41871000	Active TSS	Brain Anterior Caudate	brain
21	chr12:41870600-41871000	Flanking Active TSS	Brain Germinal Matrix	brain
22	chr12:41870600-41871200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr12:41870800-41871000	Flanking Active TSS	Brain Hippocampus Middle	brain
24	chr12:41870800-41871200	Active TSS	Brain Substantia Nigra	brain
25	chr12:41870800-41871400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
26	chr12:41870800-41873000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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