Variant report

Variant rs2757580
Chromosome Location chr6:163844635-163844636
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163837400-163857200 Weak transcription Spleen Spleen
2 chr6:163837800-163851000 Weak transcription Small Intestine intestine
3 chr6:163838000-163847600 Weak transcription Pancreas Pancrea
4 chr6:163838000-163851600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:163838000-163860600 Weak transcription Primary B cells from peripheral blood blood
6 chr6:163838400-163845000 Weak transcription Placenta Placenta
7 chr6:163838800-163845200 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr6:163839200-163845400 Enhancers Primary monocytes fromperipheralblood blood
9 chr6:163839600-163846200 Weak transcription Thymus Thymus
10 chr6:163839800-163851600 Weak transcription H1 Cell Line embryonic stem cell
11 chr6:163840000-163845000 Enhancers Colon Smooth Muscle Colon
12 chr6:163840200-163844800 Weak transcription Hela-S3 cervix
13 chr6:163840200-163844800 Enhancers HepG2 liver
14 chr6:163840800-163865000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr6:163840800-163881400 Weak transcription Fetal Stomach stomach
16 chr6:163841000-163847600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr6:163841600-163845800 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr6:163841600-163847400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr6:163841600-163847400 Weak transcription Aorta Aorta
20 chr6:163841600-163848000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr6:163841600-163848600 Weak transcription HMEC breast
22 chr6:163841600-163853200 Enhancers Adipose Nuclei Adipose
23 chr6:163841600-163858600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:163841600-163864400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr6:163841800-163845600 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr6:163841800-163848600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:163841800-163851000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr6:163842000-163845200 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr6:163842000-163846000 Weak transcription Stomach Mucosa stomach
30 chr6:163842000-163847600 Enhancers Fetal Brain Male brain
31 chr6:163842000-163848200 Weak transcription GM12878-XiMat blood
32 chr6:163842000-163850000 Weak transcription HSMMtube muscle
33 chr6:163842200-163851000 Weak transcription Primary hematopoietic stem cells blood
34 chr6:163842400-163847200 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr6:163842400-163848000 Weak transcription Fetal Lung lung
36 chr6:163842400-163849800 Weak transcription Primary T cells from cord blood blood
37 chr6:163842600-163845400 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr6:163842600-163847400 Weak transcription HUVEC blood vessel
39 chr6:163842600-163865200 Weak transcription Fetal Kidney kidney
40 chr6:163842800-163846400 Enhancers Ovary ovary
41 chr6:163843000-163844800 Enhancers HUES64 Cell Line embryonic stem cell
42 chr6:163843000-163845600 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr6:163843000-163845800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
44 chr6:163843000-163846600 Enhancers Duodenum Smooth Muscle Duodenum
45 chr6:163843200-163845400 Genic enhancers Fetal Muscle Leg muscle
46 chr6:163843200-163848600 Weak transcription Fetal Muscle Trunk muscle
47 chr6:163843400-163844800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
48 chr6:163843400-163845200 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr6:163843400-163845200 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
50 chr6:163843400-163845800 Enhancers NH-A brain

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