Variant report

Variant rs2759395
Chromosome Location chr6:163880506-163880507
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163840800-163881400 Weak transcription Fetal Stomach stomach
2 chr6:163865200-163881400 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr6:163876600-163880800 Enhancers Right Ventricle heart
4 chr6:163876600-163881000 Enhancers HSMMtube muscle
5 chr6:163876800-163880600 Genic enhancers Cortex derived primary cultured neurospheres brain
6 chr6:163876800-163881200 Weak transcription Fetal Brain Female brain
7 chr6:163877400-163880800 Genic enhancers Brain Hippocampus Middle brain
8 chr6:163877600-163881200 Enhancers Colon Smooth Muscle Colon
9 chr6:163877800-163880600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:163877800-163880600 Genic enhancers Primary monocytes fromperipheralblood blood
11 chr6:163877800-163880600 Enhancers Primary neutrophils fromperipheralblood blood
12 chr6:163877800-163881000 Weak transcription Fetal Intestine Small intestine
13 chr6:163877800-163881000 Enhancers NH-A brain
14 chr6:163877800-163881800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:163878000-163880600 Genic enhancers Monocytes-CD14+_RO01746 blood
16 chr6:163878000-163880800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr6:163878000-163881800 Enhancers HMEC breast
18 chr6:163878200-163880800 Genic enhancers GM12878-XiMat blood
19 chr6:163878400-163880600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr6:163878400-163880600 Enhancers Primary T helper cells PMA-I stimulated --
21 chr6:163878400-163881000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr6:163878400-163881200 Genic enhancers K562 blood
23 chr6:163878600-163880600 Enhancers Primary T helper cells fromperipheralblood blood
24 chr6:163878600-163881000 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr6:163878600-163881000 Enhancers Primary mononuclear cells fromperipheralblood Blood
26 chr6:163878600-163881200 Enhancers Liver Liver
27 chr6:163878600-163881200 Enhancers HSMM muscle
28 chr6:163878800-163881000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr6:163878800-163881000 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr6:163878800-163881200 Enhancers Primary B cells from peripheral blood blood
31 chr6:163878800-163881400 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr6:163878800-163881400 Weak transcription Placenta Placenta
33 chr6:163878800-163910200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr6:163879000-163880800 Enhancers HUVEC blood vessel
35 chr6:163879000-163881000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
36 chr6:163879000-163881000 Enhancers NHDF-Ad bronchial
37 chr6:163879200-163880600 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr6:163879200-163881200 Enhancers Adipose Nuclei Adipose
39 chr6:163879200-163881200 Enhancers Brain Angular Gyrus brain
40 chr6:163879200-163881200 Enhancers NHEK skin
41 chr6:163879200-163881400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr6:163879200-163881400 Weak transcription Colonic Mucosa Colon
43 chr6:163879200-163891000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:163879200-163891200 Weak transcription Fetal Kidney kidney
45 chr6:163879400-163881000 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr6:163879400-163881200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr6:163879400-163881400 Weak transcription Fetal Lung lung
48 chr6:163879400-163884200 Weak transcription HepG2 liver
49 chr6:163879400-163891000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:163879600-163881000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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