Variant report

Variant rs2757587
Chromosome Location chr6:163883083-163883084
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163878800-163910200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr6:163879200-163891000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:163879200-163891200 Weak transcription Fetal Kidney kidney
4 chr6:163879400-163884200 Weak transcription HepG2 liver
5 chr6:163879400-163891000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr6:163880400-163886000 Enhancers Fetal Heart heart
7 chr6:163880400-163888800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr6:163880600-163883200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr6:163880600-163890800 Weak transcription H1 Cell Line embryonic stem cell
10 chr6:163880600-163891000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:163880600-163891000 Weak transcription Fetal Muscle Trunk muscle
12 chr6:163880600-163896600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:163880600-163897600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:163880600-163903200 Weak transcription Pancreas Pancrea
15 chr6:163880600-163906600 Weak transcription Gastric stomach
16 chr6:163881600-163890400 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr6:163881800-163883400 Enhancers Brain Germinal Matrix brain
18 chr6:163881800-163883800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:163881800-163886000 Weak transcription Fetal Lung lung
20 chr6:163881800-163886400 Enhancers Brain Anterior Caudate brain
21 chr6:163881800-163886400 Weak transcription Fetal Stomach stomach
22 chr6:163881800-163888000 Weak transcription Left Ventricle heart
23 chr6:163881800-163888200 Weak transcription Aorta Aorta
24 chr6:163881800-163889000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr6:163881800-163890200 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr6:163881800-163890600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr6:163881800-163890600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:163881800-163897600 Weak transcription Ovary ovary
29 chr6:163881800-163901000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr6:163881800-163910800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr6:163882000-163883200 Enhancers Skeletal Muscle Male skeletal muscle
32 chr6:163882000-163883400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:163882000-163883400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:163882000-163883800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr6:163882000-163885600 Weak transcription Primary monocytes fromperipheralblood blood
36 chr6:163882000-163885800 Weak transcription Fetal Muscle Leg muscle
37 chr6:163882000-163886600 Weak transcription NHEK skin
38 chr6:163882000-163887200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr6:163882000-163890600 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr6:163882000-163891000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr6:163882000-163899800 Weak transcription Placenta Placenta
42 chr6:163882000-163900000 Weak transcription Fetal Thymus thymus
43 chr6:163882000-163906600 Weak transcription Thymus Thymus
44 chr6:163882200-163883200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr6:163882200-163883600 Weak transcription Primary hematopoietic stem cells blood
46 chr6:163882200-163883600 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:163882200-163884200 Enhancers Brain Substantia Nigra brain
48 chr6:163882200-163884400 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr6:163882200-163885000 Enhancers Brain Hippocampus Middle brain
50 chr6:163882200-163888200 Enhancers Brain Cingulate Gyrus brain

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