Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:212088119..212089857-chr1:212095536..212097139,2	K562	blood:
2	chr1:212087497..212090472-chr1:212113747..212115389,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10158561	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs10465691	0.84[CEU][hapmap];0.83[CHB][hapmap];0.80[JPT][hapmap]
rs11119806	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs1539195	0.83[CHB][hapmap]
rs2788123	0.94[ASN][1000 genomes]
rs2788124	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2788126	0.82[ASN][1000 genomes]
rs2788132	0.82[ASN][1000 genomes]
rs2788143	0.82[ASN][1000 genomes]
rs2808379	0.81[ASN][1000 genomes]
rs28790701	0.81[EUR][1000 genomes]
rs3795834	0.89[CEU][hapmap];0.89[CHB][hapmap];0.87[GIH][hapmap];0.86[TSI][hapmap]
rs4480424	0.84[CEU][hapmap];0.82[CHB][hapmap]
rs4951425	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs4951431	0.83[CHB][hapmap]
rs4951550	0.94[CEU][hapmap];0.89[CHB][hapmap]
rs4951552	0.83[CHB][hapmap]
rs4951553	0.95[CEU][hapmap];0.89[CHB][hapmap];0.81[EUR][1000 genomes]
rs6540712	0.81[ASN][1000 genomes]
rs6680326	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs6698841	0.89[CHB][hapmap];0.82[CHD][hapmap];0.87[GIH][hapmap]
rs6702617	0.83[EUR][1000 genomes]
rs7515713	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs7518285	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs7518833	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs7533951	0.83[CHB][hapmap]
rs947438	0.83[CEU][hapmap];0.83[CHB][hapmap]
rs9651110	0.83[CEU][hapmap]

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs2788122	IL10	cis	cerebellum	SCAN
rs2788122	YOD1	cis	parietal	SCAN
rs2788122	RB1CC1	cis	Frontal Cortex	GTEx
rs2788122	PIGR	cis	cerebellum	SCAN
rs2788122	RD3	cis	cerebellum	SCAN

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:212082800-212093400	Weak transcription	Right Atrium	heart
2	chr1:212084200-212090800	Weak transcription	Adipose Nuclei	Adipose
3	chr1:212084800-212089200	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr1:212084800-212089800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr1:212084800-212090800	Weak transcription	Pancreas	Pancrea
6	chr1:212084800-212113000	Weak transcription	Brain Anterior Caudate	brain
7	chr1:212085000-212089000	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr1:212085000-212090600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr1:212085400-212101800	Weak transcription	Colonic Mucosa	Colon
10	chr1:212085600-212090600	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr1:212085800-212090400	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr1:212085800-212090600	Weak transcription	Liver	Liver
13	chr1:212085800-212090800	Weak transcription	Stomach Mucosa	stomach
14	chr1:212086000-212089800	Weak transcription	HepG2	liver
15	chr1:212086000-212090600	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr1:212086600-212089600	Weak transcription	A549	lung
17	chr1:212086600-212089600	Weak transcription	Hela-S3	cervix
18	chr1:212086600-212090600	Weak transcription	Duodenum Mucosa	Duodenum
19	chr1:212087400-212088600	Weak transcription	Fetal Intestine Small	intestine
20	chr1:212088000-212099200	Enhancers	Fetal Intestine Large	intestine

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