Variant report

Variant	rs2821083
Chromosome Location	chr1:47667857-47667858
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1008455	0.81[ASN][1000 genomes]
rs11211477	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1419051	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2070929	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2181222	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2181223	0.83[ASN][1000 genomes]
rs2249636	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2250495	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2821084	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2821085	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2821086	0.81[ASN][1000 genomes]
rs9436225	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:47659000-47675800	Weak transcription	Primary hematopoietic stem cells	blood
2	chr1:47664600-47676000	Weak transcription	K562	blood
3	chr1:47666200-47669200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr1:47666600-47671600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr1:47667800-47668000	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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