The 2.0 version of rSNPBase

Variant report

Variant rs28364536
Chromosome Location chr15:42702521-42702522
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42675200-42702800 Weak transcription Colon Smooth Muscle Colon
2 chr15:42678600-42706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr15:42678800-42702800 Weak transcription NHLF lung
4 chr15:42679000-42706800 Weak transcription Right Atrium heart
5 chr15:42683800-42704600 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr15:42689000-42712400 Weak transcription Fetal Brain Male brain
7 chr15:42689400-42703200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr15:42689800-42706600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:42691000-42703000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr15:42692600-42708400 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr15:42692800-42702800 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr15:42693600-42703000 Weak transcription Brain Germinal Matrix brain
13 chr15:42694000-42703000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr15:42694200-42704000 Weak transcription Small Intestine intestine
15 chr15:42694600-42750600 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr15:42694800-42702600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr15:42694800-42703000 Weak transcription Primary hematopoietic stem cells blood
18 chr15:42694800-42706800 Weak transcription GM12878-XiMat blood
19 chr15:42694800-42708400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr15:42695000-42702600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr15:42695000-42703000 Weak transcription Colonic Mucosa Colon
22 chr15:42695000-42703000 Weak transcription HSMM muscle
23 chr15:42695000-42703200 Weak transcription Rectal Smooth Muscle rectum
24 chr15:42695000-42704000 Weak transcription HUVEC blood vessel
25 chr15:42695000-42716000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr15:42695200-42702600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr15:42695200-42702800 Weak transcription Left Ventricle heart
28 chr15:42695400-42702600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr15:42695400-42703000 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr15:42695400-42703200 Weak transcription Primary T cells fromperipheralblood blood
31 chr15:42695400-42706200 Weak transcription NH-A brain
32 chr15:42695800-42702600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr15:42696200-42703000 Weak transcription Primary B cells from peripheral blood blood
34 chr15:42696600-42702600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr15:42696600-42703000 Weak transcription Placenta Amnion Placenta Amnion
36 chr15:42697000-42702600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr15:42697000-42706400 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr15:42697000-42708400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr15:42697200-42702800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr15:42697200-42702800 Weak transcription HSMMtube muscle
41 chr15:42697200-42707800 Weak transcription K562 blood
42 chr15:42697400-42702800 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr15:42697400-42703000 Weak transcription Psoas Muscle Psoas
44 chr15:42698400-42704000 Weak transcription HMEC breast
45 chr15:42698400-42705600 Strong transcription Skeletal Muscle Male skeletal muscle
46 chr15:42698400-42707000 Weak transcription Hela-S3 cervix
47 chr15:42698400-42708400 Weak transcription Fetal Kidney kidney
48 chr15:42698600-42703000 Weak transcription NHEK skin
49 chr15:42698600-42704400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr15:42698600-42738400 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015