Variant report
| Variant | rs28364507 |
|---|---|
| Chromosome Location | chr15:42698061-42698062 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:42675200-42702800 | Weak transcription | Colon Smooth Muscle | Colon |
| 2 | chr15:42678600-42706800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 3 | chr15:42678800-42702800 | Weak transcription | NHLF | lung |
| 4 | chr15:42679000-42706800 | Weak transcription | Right Atrium | heart |
| 5 | chr15:42683800-42704600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 6 | chr15:42689000-42712400 | Weak transcription | Fetal Brain Male | brain |
| 7 | chr15:42689400-42703200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 8 | chr15:42689800-42706600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 9 | chr15:42690800-42702400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr15:42691000-42703000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 11 | chr15:42692400-42702400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 12 | chr15:42692600-42702400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 13 | chr15:42692600-42702400 | Weak transcription | Aorta | Aorta |
| 14 | chr15:42692600-42708400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 15 | chr15:42692800-42702800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr15:42693600-42703000 | Weak transcription | Brain Germinal Matrix | brain |
| 17 | chr15:42694000-42703000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 18 | chr15:42694200-42702400 | Weak transcription | Placenta | Placenta |
| 19 | chr15:42694200-42704000 | Weak transcription | Small Intestine | intestine |
| 20 | chr15:42694600-42750600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 21 | chr15:42694800-42702200 | Weak transcription | Thymus | Thymus |
| 22 | chr15:42694800-42702600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr15:42694800-42703000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 24 | chr15:42694800-42706800 | Weak transcription | GM12878-XiMat | blood |
| 25 | chr15:42694800-42708400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 26 | chr15:42695000-42699000 | Weak transcription | Pancreas | Pancrea |
| 27 | chr15:42695000-42702000 | Weak transcription | Primary T cells from cord blood | blood |
| 28 | chr15:42695000-42702200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 29 | chr15:42695000-42702600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 30 | chr15:42695000-42703000 | Weak transcription | Colonic Mucosa | Colon |
| 31 | chr15:42695000-42703000 | Weak transcription | HSMM | muscle |
| 32 | chr15:42695000-42703200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 33 | chr15:42695000-42704000 | Weak transcription | HUVEC | blood vessel |
| 34 | chr15:42695000-42716000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 35 | chr15:42695200-42698400 | Weak transcription | Fetal Thymus | thymus |
| 36 | chr15:42695200-42698800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 37 | chr15:42695200-42699000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 38 | chr15:42695200-42700800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 39 | chr15:42695200-42702600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr15:42695200-42702800 | Weak transcription | Left Ventricle | heart |
| 41 | chr15:42695400-42702400 | Weak transcription | Gastric | stomach |
| 42 | chr15:42695400-42702600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 43 | chr15:42695400-42703000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 44 | chr15:42695400-42703200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 45 | chr15:42695400-42706200 | Weak transcription | NH-A | brain |
| 46 | chr15:42695800-42702600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 47 | chr15:42696000-42698600 | Genic enhancers | Fetal Muscle Leg | muscle |
| 48 | chr15:42696000-42702200 | Weak transcription | Esophagus | oesophagus |
| 49 | chr15:42696200-42703000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 50 | chr15:42696400-42698200 | Enhancers | Liver | Liver |
