The 2.0 version of rSNPBase

Variant report

Variant rs6493038
Chromosome Location chr15:42594446-42594447
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42567200-42623600 Weak transcription Fetal Brain Male brain
2 chr15:42568400-42604600 Weak transcription NH-A brain
3 chr15:42568400-42656000 Weak transcription Small Intestine intestine
4 chr15:42568600-42602600 Weak transcription Fetal Heart heart
5 chr15:42568600-42630800 Weak transcription Dnd41 blood
6 chr15:42569400-42602800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr15:42573400-42635800 Weak transcription Gastric stomach
8 chr15:42573600-42602600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:42573800-42605600 Weak transcription Pancreas Pancrea
10 chr15:42576200-42602800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr15:42576200-42605800 Weak transcription Esophagus oesophagus
12 chr15:42576400-42602000 Weak transcription Colonic Mucosa Colon
13 chr15:42576400-42620800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:42577800-42616200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:42581600-42601600 Weak transcription Rectal Smooth Muscle rectum
16 chr15:42581800-42602600 Weak transcription HMEC breast
17 chr15:42582000-42601000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr15:42582000-42613400 Weak transcription HUVEC blood vessel
19 chr15:42583400-42598800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr15:42584200-42599200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr15:42584400-42599000 Weak transcription Aorta Aorta
22 chr15:42585400-42601200 Weak transcription Brain Cingulate Gyrus brain
23 chr15:42585400-42601400 Weak transcription Right Ventricle heart
24 chr15:42585400-42623600 Weak transcription Colon Smooth Muscle Colon
25 chr15:42585600-42595200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr15:42585600-42598800 Weak transcription Ovary ovary
27 chr15:42585600-42599000 Weak transcription Stomach Smooth Muscle stomach
28 chr15:42585600-42599600 Weak transcription Psoas Muscle Psoas
29 chr15:42585600-42602000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr15:42585600-42602600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr15:42585600-42604400 Weak transcription Fetal Kidney kidney
32 chr15:42585600-42607600 Weak transcription NHLF lung
33 chr15:42585800-42602600 Weak transcription Placenta Amnion Placenta Amnion
34 chr15:42586000-42595000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr15:42586200-42613800 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr15:42586600-42599200 Weak transcription Thymus Thymus
37 chr15:42586600-42600200 Weak transcription Spleen Spleen
38 chr15:42587400-42599000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr15:42588400-42599000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr15:42590400-42598600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr15:42590400-42598600 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr15:42590400-42598800 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr15:42590400-42598800 Weak transcription Brain Hippocampus Middle brain
44 chr15:42590400-42599600 Weak transcription Brain Anterior Caudate brain
45 chr15:42590400-42600000 Weak transcription Muscle Satellite Cultured Cells --
46 chr15:42590400-42600200 Weak transcription NHDF-Ad bronchial
47 chr15:42590400-42601200 Weak transcription Brain Inferior Temporal Lobe brain
48 chr15:42590400-42602600 Weak transcription Osteobl bone
49 chr15:42590600-42598600 Weak transcription Primary T cells fromperipheralblood blood
50 chr15:42590600-42598800 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015