Variant report
| Variant | rs28489155 |
|---|---|
| Chromosome Location | chr15:42658528-42658529 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:42639400-42658600 | Weak transcription | Hela-S3 | cervix |
| 2 | chr15:42645600-42663000 | Weak transcription | NHDF-Ad | bronchial |
| 3 | chr15:42645600-42663600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 4 | chr15:42645600-42677800 | Weak transcription | Spleen | Spleen |
| 5 | chr15:42646000-42662600 | Weak transcription | Brain Substantia Nigra | brain |
| 6 | chr15:42646000-42678600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr15:42647800-42678200 | Weak transcription | Ovary | ovary |
| 8 | chr15:42649600-42659000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 9 | chr15:42649800-42659800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 10 | chr15:42649800-42673200 | Weak transcription | Thymus | Thymus |
| 11 | chr15:42650200-42659600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr15:42650600-42661000 | Weak transcription | Esophagus | oesophagus |
| 13 | chr15:42650600-42661600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 14 | chr15:42650800-42659400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 15 | chr15:42650800-42664000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 16 | chr15:42651200-42659600 | Weak transcription | Primary T cells from cord blood | blood |
| 17 | chr15:42652400-42660600 | Weak transcription | Aorta | Aorta |
| 18 | chr15:42652400-42665400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr15:42652800-42684400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 20 | chr15:42653200-42659200 | Enhancers | Psoas Muscle | Psoas |
| 21 | chr15:42653200-42691600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 22 | chr15:42653400-42659600 | Weak transcription | Fetal Intestine Small | intestine |
| 23 | chr15:42654200-42677800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr15:42654400-42665400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 25 | chr15:42654800-42669400 | Weak transcription | Liver | Liver |
| 26 | chr15:42656000-42678800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 27 | chr15:42656800-42663600 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 28 | chr15:42656800-42693400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 29 | chr15:42656800-42697800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 30 | chr15:42657000-42659200 | Enhancers | Primary B cells from cord blood | blood |
| 31 | chr15:42657000-42665600 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr15:42657000-42665600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 33 | chr15:42657200-42659200 | Weak transcription | Lung | lung |
| 34 | chr15:42657200-42659400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 35 | chr15:42657200-42660200 | Weak transcription | Fetal Muscle Leg | muscle |
| 36 | chr15:42657200-42665800 | Weak transcription | Left Ventricle | heart |
| 37 | chr15:42657200-42678800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr15:42657600-42659000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 39 | chr15:42657800-42659400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr15:42657800-42660200 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 41 | chr15:42658000-42658600 | Flanking Active TSS | Skeletal Muscle Male | skeletal muscle |
| 42 | chr15:42658000-42658600 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 43 | chr15:42658200-42658600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr15:42658400-42660800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
