Variant report
| Variant | rs28364557 |
|---|---|
| Chromosome Location | chr15:42706022-42706023 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:42678600-42706800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr15:42679000-42706800 | Weak transcription | Right Atrium | heart |
| 3 | chr15:42689000-42712400 | Weak transcription | Fetal Brain Male | brain |
| 4 | chr15:42689800-42706600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 5 | chr15:42692600-42708400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 6 | chr15:42694600-42750600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 7 | chr15:42694800-42706800 | Weak transcription | GM12878-XiMat | blood |
| 8 | chr15:42694800-42708400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr15:42695000-42716000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 10 | chr15:42695400-42706200 | Weak transcription | NH-A | brain |
| 11 | chr15:42697000-42706400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 12 | chr15:42697000-42708400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr15:42697200-42707800 | Weak transcription | K562 | blood |
| 14 | chr15:42698400-42707000 | Weak transcription | Hela-S3 | cervix |
| 15 | chr15:42698400-42708400 | Weak transcription | Fetal Kidney | kidney |
| 16 | chr15:42698600-42738400 | Strong transcription | Fetal Muscle Leg | muscle |
| 17 | chr15:42699200-42741600 | Strong transcription | Fetal Muscle Trunk | muscle |
| 18 | chr15:42700000-42732400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr15:42700200-42713600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 20 | chr15:42700600-42710200 | Strong transcription | Brain Anterior Caudate | brain |
| 21 | chr15:42700800-42708200 | Weak transcription | Stomach Mucosa | stomach |
| 22 | chr15:42700800-42732000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 23 | chr15:42700800-42747200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr15:42701000-42719200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 25 | chr15:42701000-42738800 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 26 | chr15:42701200-42766600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 27 | chr15:42701400-42710200 | Strong transcription | Brain Cingulate Gyrus | brain |
| 28 | chr15:42701400-42710200 | Strong transcription | Brain Hippocampus Middle | brain |
| 29 | chr15:42701400-42710200 | Strong transcription | Brain Substantia Nigra | brain |
| 30 | chr15:42701400-42732600 | Strong transcription | Adipose Nuclei | Adipose |
| 31 | chr15:42701600-42744200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 32 | chr15:42701800-42732400 | Strong transcription | Fetal Intestine Large | intestine |
| 33 | chr15:42702000-42706400 | Weak transcription | HepG2 | liver |
| 34 | chr15:42702000-42711400 | Strong transcription | Primary T cells from cord blood | blood |
| 35 | chr15:42702200-42719200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 36 | chr15:42702200-42750200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 37 | chr15:42702400-42710200 | Strong transcription | Primary B cells from cord blood | blood |
| 38 | chr15:42702400-42732600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 39 | chr15:42702400-42744200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 40 | chr15:42702400-42744200 | Strong transcription | Liver | Liver |
| 41 | chr15:42702600-42707400 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 42 | chr15:42702600-42708200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 43 | chr15:42702600-42708400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 44 | chr15:42702600-42709800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 45 | chr15:42702600-42713000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 46 | chr15:42702600-42719400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 47 | chr15:42702600-42724000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 48 | chr15:42702600-42732400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 49 | chr15:42702600-42738800 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 50 | chr15:42702600-42744400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
