Variant report

Variant	rs1659214
Chromosome Location	chr15:42619947-42619948
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:42584658..42587621-chr15:42618841..42621037,2	K562	blood:

Extended variants
information (count: 239 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:233)

rs_ID	r²[population]
rs10518757	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11070367	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11070368	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11070369	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11070371	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11631711	1.00[ASN][1000 genomes]
rs11631756	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11631823	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11631922	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11633276	1.00[EUR][1000 genomes]
rs11635876	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11637010	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11637045	1.00[ASN][1000 genomes]
rs11856797	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11856807	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11858453	1.00[ASN][1000 genomes]
rs12102204	1.00[EUR][1000 genomes]
rs12324205	1.00[JPT][hapmap]
rs12324804	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs12437815	1.00[ASN][1000 genomes]
rs12441027	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12592200	1.00[ASN][1000 genomes]
rs12902924	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12903494	0.97[ASN][1000 genomes]
rs12907489	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12913755	1.00[ASN][1000 genomes]
rs12916523	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12916792	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs1659215	0.82[JPT][hapmap];0.91[YRI][hapmap];0.94[ASN][1000 genomes]
rs1659216	0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1659220	0.82[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1659221	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs1659223	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1659224	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1659225	1.00[EUR][1000 genomes]
rs1659226	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1678997	1.00[ASN][1000 genomes]
rs1678998	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1678999	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1679000	0.80[YRI][hapmap]
rs1679008	1.00[YRI][hapmap]
rs1679011	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs1712410	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs1712417	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs1871156	1.00[EUR][1000 genomes]
rs2244773	1.00[EUR][1000 genomes]
rs2289293	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs2289297	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412675	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2412676	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2412677	1.00[ASN][1000 genomes]
rs2412678	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412681	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412683	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412684	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412686	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412689	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412690	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412691	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412694	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412695	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2412696	0.94[ASN][1000 genomes]
rs2412697	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412698	1.00[ASN][1000 genomes]
rs2412699	1.00[ASN][1000 genomes]
rs2412700	0.89[ASN][1000 genomes]
rs2412701	0.97[ASN][1000 genomes]
rs2412702	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412716	1.00[EUR][1000 genomes]
rs2578651	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2595935	1.00[EUR][1000 genomes]
rs2620372	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2620374	1.00[ASN][1000 genomes]
rs2620375	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2620378	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs2620381	0.88[AFR][1000 genomes]
rs2663092	0.85[AFR][1000 genomes]
rs28364379	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28364398	1.00[EUR][1000 genomes]
rs28364400	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28364462	1.00[EUR][1000 genomes]
rs28364472	1.00[EUR][1000 genomes]
rs28364475	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs28364491	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs28364495	0.82[CHB][hapmap];1.00[EUR][1000 genomes]
rs28364498	1.00[EUR][1000 genomes]
rs28364500	1.00[EUR][1000 genomes]
rs28364503	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs28364504	0.82[CHB][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28364507	1.00[EUR][1000 genomes]
rs28364508	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs28364509	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs28364511	0.82[CHB][hapmap];1.00[EUR][1000 genomes]
rs28364519	0.82[CHB][hapmap];1.00[EUR][1000 genomes]
rs28364522	1.00[EUR][1000 genomes]
rs28364523	1.00[EUR][1000 genomes]
rs28364524	1.00[EUR][1000 genomes]
rs28364526	1.00[EUR][1000 genomes]
rs28364540	1.00[EUR][1000 genomes]
rs28364541	1.00[EUR][1000 genomes]
rs28364544	0.82[CHB][hapmap];0.82[JPT][hapmap];1.00[EUR][1000 genomes]
rs28364557	1.00[EUR][1000 genomes]
rs28364559	0.82[CHB][hapmap]
rs28489155	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28621687	1.00[EUR][1000 genomes]
rs28745879	1.00[EUR][1000 genomes]
rs2899044	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2899058	1.00[EUR][1000 genomes]
rs2918458	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3098422	1.00[ASN][1000 genomes]
rs3101895	1.00[ASN][1000 genomes]
rs3736095	1.00[ASN][1000 genomes]
rs3736096	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3736097	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3743002	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs3743003	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs3803342	1.00[EUR][1000 genomes]
rs4244589	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4268723	1.00[ASN][1000 genomes]
rs4480780	1.00[ASN][1000 genomes]
rs4556762	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4583208	0.84[ASN][1000 genomes]
rs4583209	1.00[ASN][1000 genomes]
rs4595775	1.00[ASN][1000 genomes]
rs4617834	1.00[ASN][1000 genomes]
rs4923935	1.00[YRI][hapmap]
rs4923936	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4923937	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4923938	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4923939	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4923941	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4923942	1.00[ASN][1000 genomes]
rs4923944	1.00[ASN][1000 genomes]
rs4924636	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs4924638	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs4924640	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4924641	1.00[JPT][hapmap];0.90[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924642	1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924643	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924649	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924650	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924651	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924652	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924655	1.00[ASN][1000 genomes]
rs4924656	1.00[ASN][1000 genomes]
rs4924657	0.82[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924659	1.00[ASN][1000 genomes]
rs4924662	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924663	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924664	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924665	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924666	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924667	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924668	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924669	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4924670	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924671	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs5028173	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5028174	1.00[ASN][1000 genomes]
rs5029919	0.82[CHB][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs57052341	0.94[ASN][1000 genomes]
rs595661	1.00[EUR][1000 genomes]
rs614733	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs621365	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs636604	0.91[YRI][hapmap]
rs644627	0.83[YRI][hapmap]
rs645304	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs6493024	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6493026	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493028	1.00[ASN][1000 genomes]
rs6493029	1.00[ASN][1000 genomes]
rs6493031	1.00[EUR][1000 genomes]
rs6493034	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493037	1.00[ASN][1000 genomes]
rs6493038	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493039	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6493040	1.00[ASN][1000 genomes]
rs6493041	0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493047	1.00[EUR][1000 genomes]
rs6493051	1.00[EUR][1000 genomes]
rs655704	1.00[EUR][1000 genomes]
rs668973	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs670329	0.89[YRI][hapmap]
rs670421	0.80[YRI][hapmap]
rs672946	0.84[YRI][hapmap];0.88[AFR][1000 genomes]
rs67384392	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs677845	0.80[YRI][hapmap]
rs685447	1.00[EUR][1000 genomes]
rs7161982	0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7163345	1.00[ASN][1000 genomes]
rs7163941	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7164480	0.91[ASN][1000 genomes]
rs7164484	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7167306	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7169279	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7169553	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7170592	1.00[ASN][1000 genomes]
rs7170943	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7171379	1.00[ASN][1000 genomes]
rs7171709	1.00[ASN][1000 genomes]
rs7172709	0.82[ASN][1000 genomes]
rs7173358	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7176663	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7176724	1.00[ASN][1000 genomes]
rs7177193	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7177463	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7177521	1.00[EUR][1000 genomes]
rs7178396	1.00[EUR][1000 genomes]
rs7181940	1.00[EUR][1000 genomes]
rs7182777	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7182963	1.00[JPT][hapmap]
rs7183399	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7183843	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8023568	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8023678	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8023714	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8024390	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8025364	0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap]
rs8030212	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8031735	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs8036149	1.00[EUR][1000 genomes]
rs8036163	1.00[EUR][1000 genomes]
rs8036917	0.88[AFR][1000 genomes]
rs8037100	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs8037627	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8040698	1.00[ASN][1000 genomes]
rs8040720	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8042603	1.00[EUR][1000 genomes]
rs8043033	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8043515	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs936603	1.00[EUR][1000 genomes]
rs9783720	0.88[AFR][1000 genomes]
rs9920851	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931223	chr15:41989960-42781757	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
2	nsv529687	chr15:42157320-42621682	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
3	nsv1049445	chr15:42239738-42830484	Enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
4	nsv542366	chr15:42239738-42830484	Weak transcription Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
5	nsv904133	chr15:42528982-42681057	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
6	nsv832986	chr15:42587825-42753664	Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:42567200-42623600	Weak transcription	Fetal Brain Male	brain
2	chr15:42568400-42656000	Weak transcription	Small Intestine	intestine
3	chr15:42568600-42630800	Weak transcription	Dnd41	blood
4	chr15:42573400-42635800	Weak transcription	Gastric	stomach
5	chr15:42576400-42620800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr15:42585400-42623600	Weak transcription	Colon Smooth Muscle	Colon
7	chr15:42596800-42625200	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr15:42597800-42621200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr15:42600400-42626400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr15:42600600-42627200	Weak transcription	Fetal Brain Female	brain
11	chr15:42601200-42636000	Weak transcription	Brain Germinal Matrix	brain
12	chr15:42603200-42627200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr15:42603200-42636000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr15:42603400-42622400	Weak transcription	Fetal Heart	heart
15	chr15:42603400-42623200	Weak transcription	Brain Angular Gyrus	brain
16	chr15:42603400-42648600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr15:42603400-42648600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
18	chr15:42604000-42639400	Weak transcription	Placenta Amnion	Placenta Amnion
19	chr15:42604600-42651200	Weak transcription	Fetal Kidney	kidney
20	chr15:42606000-42620400	Weak transcription	Primary hematopoietic stem cells	blood
21	chr15:42606200-42634600	Weak transcription	Pancreas	Pancrea
22	chr15:42613000-42622200	Strong transcription	Duodenum Mucosa	Duodenum
23	chr15:42613000-42623800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr15:42613000-42624000	Strong transcription	Primary monocytes fromperipheralblood	blood
25	chr15:42613000-42624000	Strong transcription	Monocytes-CD14+_RO01746	blood
26	chr15:42613400-42621400	Strong transcription	Primary T cells fromperipheralblood	blood
27	chr15:42613400-42624200	Strong transcription	Primary B cells from cord blood	blood
28	chr15:42613400-42626400	Strong transcription	Primary B cells from peripheral blood	blood
29	chr15:42613600-42622200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr15:42613600-42623800	Strong transcription	Adipose Nuclei	Adipose
31	chr15:42613800-42623800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr15:42614000-42620800	Strong transcription	Primary T helper cells PMA-I stimulated	--
33	chr15:42614000-42623800	Strong transcription	Liver	Liver
34	chr15:42614200-42623800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
35	chr15:42614200-42624600	Weak transcription	HUVEC	blood vessel
36	chr15:42614200-42624800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr15:42614800-42627200	Weak transcription	Psoas Muscle	Psoas
38	chr15:42615000-42627200	Weak transcription	Fetal Intestine Small	intestine
39	chr15:42615600-42623000	Weak transcription	Esophagus	oesophagus
40	chr15:42615600-42625600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr15:42615600-42629000	Weak transcription	Right Ventricle	heart
42	chr15:42615600-42631800	Weak transcription	Lung	lung
43	chr15:42616200-42622000	Weak transcription	Fetal Muscle Trunk	muscle
44	chr15:42616200-42634600	Weak transcription	Fetal Stomach	stomach
45	chr15:42616200-42636600	Weak transcription	NHEK	skin
46	chr15:42616600-42621000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr15:42616600-42623400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr15:42616800-42623400	Weak transcription	HSMMtube	muscle
49	chr15:42616800-42624400	Weak transcription	Muscle Satellite Cultured Cells	--
50	chr15:42616800-42636000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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