The 2.0 version of rSNPBase

Variant report

Variant rs7163345
Chromosome Location chr15:42600774-42600775
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42567200-42623600 Weak transcription Fetal Brain Male brain
2 chr15:42568400-42604600 Weak transcription NH-A brain
3 chr15:42568400-42656000 Weak transcription Small Intestine intestine
4 chr15:42568600-42602600 Weak transcription Fetal Heart heart
5 chr15:42568600-42630800 Weak transcription Dnd41 blood
6 chr15:42569400-42602800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr15:42573400-42635800 Weak transcription Gastric stomach
8 chr15:42573600-42602600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:42573800-42605600 Weak transcription Pancreas Pancrea
10 chr15:42576200-42602800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr15:42576200-42605800 Weak transcription Esophagus oesophagus
12 chr15:42576400-42602000 Weak transcription Colonic Mucosa Colon
13 chr15:42576400-42620800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:42577800-42616200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:42581600-42601600 Weak transcription Rectal Smooth Muscle rectum
16 chr15:42581800-42602600 Weak transcription HMEC breast
17 chr15:42582000-42601000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr15:42582000-42613400 Weak transcription HUVEC blood vessel
19 chr15:42585400-42601200 Weak transcription Brain Cingulate Gyrus brain
20 chr15:42585400-42601400 Weak transcription Right Ventricle heart
21 chr15:42585400-42623600 Weak transcription Colon Smooth Muscle Colon
22 chr15:42585600-42602000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr15:42585600-42602600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr15:42585600-42604400 Weak transcription Fetal Kidney kidney
25 chr15:42585600-42607600 Weak transcription NHLF lung
26 chr15:42585800-42602600 Weak transcription Placenta Amnion Placenta Amnion
27 chr15:42586200-42613800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr15:42590400-42601200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr15:42590400-42602600 Weak transcription Osteobl bone
30 chr15:42590800-42601200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr15:42591000-42602600 Weak transcription HSMM muscle
32 chr15:42591000-42602800 Weak transcription HSMMtube muscle
33 chr15:42593800-42616000 Weak transcription Hela-S3 cervix
34 chr15:42596000-42602800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:42596600-42604800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr15:42596800-42609800 Weak transcription H1 Cell Line embryonic stem cell
37 chr15:42596800-42625200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr15:42597000-42602200 Weak transcription Primary hematopoietic stem cells blood
39 chr15:42597000-42614600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr15:42597800-42621200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr15:42598600-42603400 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr15:42598600-42604400 Strong transcription Primary T cells fromperipheralblood blood
43 chr15:42598600-42604600 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr15:42598600-42606000 Strong transcription Liver Liver
45 chr15:42598600-42606600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr15:42598600-42606600 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr15:42598600-42606800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr15:42598600-42607000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr15:42598600-42607600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr15:42598600-42607800 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015