Variant report

Variant rs4924641
Chromosome Location chr15:42545982-42545983
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42500800-42563200 Weak transcription Stomach Mucosa stomach
2 chr15:42519400-42562800 Weak transcription Fetal Heart heart
3 chr15:42520200-42561000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr15:42521000-42551000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr15:42527200-42548200 Weak transcription Placenta Amnion Placenta Amnion
6 chr15:42528800-42548800 Weak transcription Small Intestine intestine
7 chr15:42529800-42548400 Weak transcription Brain Cingulate Gyrus brain
8 chr15:42530200-42546400 Weak transcription Brain Hippocampus Middle brain
9 chr15:42530600-42548800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr15:42530800-42551600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr15:42530800-42551600 Weak transcription Right Ventricle heart
12 chr15:42531800-42551800 Weak transcription Psoas Muscle Psoas
13 chr15:42532000-42551600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr15:42532200-42551000 Weak transcription HMEC breast
15 chr15:42532200-42552800 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr15:42532400-42548200 Weak transcription Colon Smooth Muscle Colon
17 chr15:42532400-42548400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr15:42534800-42548400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr15:42535200-42546400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr15:42536600-42546600 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr15:42542400-42547200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr15:42542800-42546000 ZNF genes & repeats Fetal Intestine Small intestine
23 chr15:42542800-42547600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr15:42542800-42550000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr15:42542800-42561600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr15:42543400-42546200 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr15:42543400-42547800 ZNF genes & repeats H1 Cell Line embryonic stem cell
28 chr15:42543400-42551000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
29 chr15:42543400-42559000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr15:42543400-42561200 Strong transcription Liver Liver
31 chr15:42543600-42547600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
32 chr15:42543600-42548600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
33 chr15:42543600-42552600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr15:42543600-42561000 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr15:42543800-42546200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr15:42543800-42546400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr15:42543800-42546400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
38 chr15:42543800-42547200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr15:42543800-42547600 Strong transcription Fetal Lung lung
40 chr15:42543800-42549600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
41 chr15:42543800-42552800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr15:42543800-42556600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr15:42543800-42557000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr15:42543800-42560200 Strong transcription Duodenum Mucosa Duodenum
45 chr15:42543800-42560800 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr15:42543800-42561600 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr15:42544000-42546000 Strong transcription Muscle Satellite Cultured Cells --
48 chr15:42544000-42546000 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr15:42544000-42546400 Strong transcription NHLF lung
50 chr15:42544000-42560600 Strong transcription Adipose Nuclei Adipose

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