The 2.0 version of rSNPBase

Variant report

Variant rs2412675
Chromosome Location chr15:42543127-42543128
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42500800-42563200 Weak transcription Stomach Mucosa stomach
2 chr15:42503200-42544000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:42515000-42544600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr15:42519200-42543800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr15:42519200-42543800 Weak transcription Gastric stomach
6 chr15:42519400-42562800 Weak transcription Fetal Heart heart
7 chr15:42520200-42561000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr15:42521000-42551000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr15:42527200-42548200 Weak transcription Placenta Amnion Placenta Amnion
10 chr15:42528800-42548800 Weak transcription Small Intestine intestine
11 chr15:42529000-42544000 Weak transcription Spleen Spleen
12 chr15:42529200-42544000 Weak transcription Esophagus oesophagus
13 chr15:42529200-42544000 Weak transcription Ovary ovary
14 chr15:42529800-42544200 Weak transcription Rectal Smooth Muscle rectum
15 chr15:42529800-42548400 Weak transcription Brain Cingulate Gyrus brain
16 chr15:42530200-42546400 Weak transcription Brain Hippocampus Middle brain
17 chr15:42530400-42544600 Weak transcription A549 lung
18 chr15:42530600-42548800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr15:42530800-42544000 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr15:42530800-42551600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr15:42530800-42551600 Weak transcription Right Ventricle heart
22 chr15:42531000-42543800 Weak transcription Aorta Aorta
23 chr15:42531600-42543400 Weak transcription Fetal Stomach stomach
24 chr15:42531600-42543800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr15:42531800-42543800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr15:42531800-42543800 Weak transcription Colonic Mucosa Colon
27 chr15:42531800-42544200 Weak transcription Brain Anterior Caudate brain
28 chr15:42531800-42551800 Weak transcription Psoas Muscle Psoas
29 chr15:42532000-42543400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr15:42532000-42544400 Weak transcription NHEK skin
31 chr15:42532000-42551600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr15:42532200-42543400 Weak transcription H1 Cell Line embryonic stem cell
33 chr15:42532200-42543800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr15:42532200-42544000 Weak transcription Pancreas Pancrea
35 chr15:42532200-42544200 Weak transcription HSMMtube muscle
36 chr15:42532200-42545600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr15:42532200-42551000 Weak transcription HMEC breast
38 chr15:42532200-42552800 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr15:42532400-42543800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr15:42532400-42544000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr15:42532400-42544200 Weak transcription Brain Angular Gyrus brain
42 chr15:42532400-42544600 Weak transcription K562 blood
43 chr15:42532400-42548200 Weak transcription Colon Smooth Muscle Colon
44 chr15:42532400-42548400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr15:42532600-42544600 Weak transcription NH-A brain
46 chr15:42532800-42544200 Weak transcription HSMM muscle
47 chr15:42533000-42544400 Weak transcription Hela-S3 cervix
48 chr15:42533600-42543400 Weak transcription Primary T cells fromperipheralblood blood
49 chr15:42534000-42543400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr15:42534000-42543800 Weak transcription Lung lung

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Last update: Aug 31, 2015