Variant report

Variant rs644627
Chromosome Location chr15:42451514-42451515
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42436000-42452000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr15:42439400-42451800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr15:42444000-42451600 Weak transcription HUVEC blood vessel
4 chr15:42448200-42453000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr15:42448400-42452400 Weak transcription Fetal Kidney kidney
6 chr15:42448600-42452800 Weak transcription Hela-S3 cervix
7 chr15:42448600-42453800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr15:42448800-42452200 Weak transcription Small Intestine intestine
9 chr15:42449000-42452200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr15:42449000-42452400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr15:42449000-42481800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr15:42449200-42452400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr15:42449200-42453800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr15:42449200-42456000 Weak transcription Stomach Mucosa stomach
15 chr15:42449400-42451600 Weak transcription Dnd41 blood
16 chr15:42449400-42451800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr15:42449600-42452200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr15:42449600-42468200 Strong transcription Fetal Brain Female brain
19 chr15:42449800-42452200 Enhancers Left Ventricle heart
20 chr15:42450200-42451600 Enhancers Placenta Amnion Placenta Amnion
21 chr15:42450200-42451600 Enhancers NH-A brain
22 chr15:42450200-42452000 Genic enhancers Esophagus oesophagus
23 chr15:42450200-42468600 Strong transcription Fetal Stomach stomach
24 chr15:42450200-42472400 Strong transcription Fetal Intestine Small intestine
25 chr15:42450400-42451800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr15:42450400-42452200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr15:42450400-42457000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr15:42450400-42468400 Strong transcription Primary T cells from cord blood blood
29 chr15:42450400-42468400 Strong transcription Fetal Muscle Trunk muscle
30 chr15:42450400-42476600 Strong transcription Fetal Muscle Leg muscle
31 chr15:42450600-42452800 Enhancers Fetal Heart heart
32 chr15:42450600-42457400 Strong transcription Primary neutrophils fromperipheralblood blood
33 chr15:42450600-42460800 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr15:42450600-42463400 Strong transcription Sigmoid Colon Sigmoid Colon
35 chr15:42450600-42468000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr15:42450600-42468200 Strong transcription Brain Germinal Matrix brain
37 chr15:42450600-42479800 Weak transcription Psoas Muscle Psoas
38 chr15:42450600-42485000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr15:42450600-42486200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr15:42450600-42487400 Strong transcription Primary B cells from cord blood blood
41 chr15:42450800-42451600 Genic enhancers K562 blood
42 chr15:42450800-42451800 Strong transcription Fetal Thymus thymus
43 chr15:42450800-42463400 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr15:42450800-42471400 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr15:42450800-42484000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr15:42450800-42485000 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr15:42450800-42485200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr15:42451000-42451600 Genic enhancers HSMMtube muscle
49 chr15:42451000-42452200 Genic enhancers Lung lung
50 chr15:42451000-42452200 Enhancers Right Atrium heart

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