Variant report

Variant rs588695
Chromosome Location chr15:42454464-42454465
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42449000-42481800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr15:42449200-42456000 Weak transcription Stomach Mucosa stomach
3 chr15:42449600-42468200 Strong transcription Fetal Brain Female brain
4 chr15:42450200-42468600 Strong transcription Fetal Stomach stomach
5 chr15:42450200-42472400 Strong transcription Fetal Intestine Small intestine
6 chr15:42450400-42457000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr15:42450400-42468400 Strong transcription Primary T cells from cord blood blood
8 chr15:42450400-42468400 Strong transcription Fetal Muscle Trunk muscle
9 chr15:42450400-42476600 Strong transcription Fetal Muscle Leg muscle
10 chr15:42450600-42457400 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr15:42450600-42460800 Strong transcription Cortex derived primary cultured neurospheres brain
12 chr15:42450600-42463400 Strong transcription Sigmoid Colon Sigmoid Colon
13 chr15:42450600-42468000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr15:42450600-42468200 Strong transcription Brain Germinal Matrix brain
15 chr15:42450600-42479800 Weak transcription Psoas Muscle Psoas
16 chr15:42450600-42485000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr15:42450600-42486200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr15:42450600-42487400 Strong transcription Primary B cells from cord blood blood
19 chr15:42450800-42463400 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr15:42450800-42471400 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr15:42450800-42484000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
22 chr15:42450800-42485000 Strong transcription Primary hematopoietic stem cells short term culture blood
23 chr15:42450800-42485200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr15:42451000-42460800 Strong transcription Brain Inferior Temporal Lobe brain
25 chr15:42451000-42460800 Strong transcription HepG2 liver
26 chr15:42451000-42461000 Strong transcription H9 Cell Line embryonic stem cell
27 chr15:42451000-42461000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr15:42451000-42461200 Strong transcription Gastric stomach
29 chr15:42451000-42461200 Strong transcription Spleen Spleen
30 chr15:42451000-42462000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr15:42451000-42462000 Strong transcription Colonic Mucosa Colon
32 chr15:42451000-42462400 Strong transcription Primary T helper naive cells fromperipheralblood blood
33 chr15:42451000-42462600 Strong transcription H1 Cell Line embryonic stem cell
34 chr15:42451000-42463200 Strong transcription Adipose Nuclei Adipose
35 chr15:42451000-42463400 Strong transcription Duodenum Mucosa Duodenum
36 chr15:42451000-42463400 Strong transcription GM12878-XiMat blood
37 chr15:42451000-42463600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr15:42451000-42466000 Strong transcription iPS-18 Cell Line embryonic stem cell
39 chr15:42451000-42466000 Strong transcription Colon Smooth Muscle Colon
40 chr15:42451000-42466000 Strong transcription Pancreas Pancrea
41 chr15:42451000-42468600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr15:42451000-42471000 Strong transcription HUES6 Cell Line embryonic stem cell
43 chr15:42451000-42479600 Strong transcription Liver Liver
44 chr15:42451000-42484000 Strong transcription Placenta Placenta
45 chr15:42451000-42484400 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr15:42451000-42484800 Strong transcription Fetal Intestine Large intestine
47 chr15:42451000-42484800 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr15:42451000-42485000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr15:42451000-42485000 Strong transcription Thymus Thymus
50 chr15:42451000-42487600 Strong transcription Primary T helper cells fromperipheralblood blood

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