The 2.0 version of rSNPBase

Variant report

Variant rs641119
Chromosome Location chr15:42489738-42489739
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42460000-42499200 Weak transcription A549 lung
2 chr15:42460000-42499800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:42466000-42498800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr15:42475000-42499200 Weak transcription Stomach Mucosa stomach
5 chr15:42476800-42499600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:42477200-42497800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr15:42478400-42498600 Weak transcription Gastric stomach
8 chr15:42480200-42496000 Weak transcription Esophagus oesophagus
9 chr15:42480400-42498600 Weak transcription Small Intestine intestine
10 chr15:42480400-42498800 Weak transcription Right Ventricle heart
11 chr15:42480600-42491400 Weak transcription Psoas Muscle Psoas
12 chr15:42480600-42496000 Weak transcription Spleen Spleen
13 chr15:42481200-42499800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr15:42481600-42497600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr15:42481600-42497600 Weak transcription HUVEC blood vessel
16 chr15:42481600-42498600 Weak transcription Fetal Brain Male brain
17 chr15:42482800-42499400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr15:42483200-42499400 Weak transcription H1 Cell Line embryonic stem cell
19 chr15:42483400-42498600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr15:42483400-42498600 Weak transcription Fetal Kidney kidney
21 chr15:42483600-42497600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr15:42483600-42498600 Weak transcription Brain Substantia Nigra brain
23 chr15:42483600-42498600 Weak transcription K562 blood
24 chr15:42483600-42499200 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr15:42483800-42492600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr15:42483800-42499400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr15:42484000-42489800 Weak transcription NHDF-Ad bronchial
28 chr15:42484000-42499200 Weak transcription HMEC breast
29 chr15:42484200-42490000 Weak transcription Rectal Smooth Muscle rectum
30 chr15:42484200-42491600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr15:42484200-42493400 Weak transcription Muscle Satellite Cultured Cells --
32 chr15:42484400-42489800 Weak transcription HSMM muscle
33 chr15:42484400-42490000 Weak transcription Ovary ovary
34 chr15:42484400-42495800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr15:42484400-42499400 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr15:42484800-42489800 Weak transcription Brain Cingulate Gyrus brain
37 chr15:42484800-42489800 Weak transcription Dnd41 blood
38 chr15:42484800-42490000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr15:42484800-42490000 Weak transcription Brain Hippocampus Middle brain
40 chr15:42484800-42490200 Weak transcription NHLF lung
41 chr15:42484800-42490200 Weak transcription Osteobl bone
42 chr15:42484800-42490400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr15:42484800-42490400 Weak transcription Duodenum Mucosa Duodenum
44 chr15:42484800-42498600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr15:42484800-42498800 Weak transcription NHEK skin
46 chr15:42484800-42499400 Weak transcription Left Ventricle heart
47 chr15:42485000-42490200 Weak transcription Brain Angular Gyrus brain
48 chr15:42485000-42493400 Weak transcription Lung lung
49 chr15:42486600-42491400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr15:42487000-42496000 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015