The 2.0 version of rSNPBase

Variant report

Variant rs12915387
Chromosome Location chr15:42513308-42513309
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42500600-42513800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:42500800-42563200 Weak transcription Stomach Mucosa stomach
3 chr15:42501000-42513600 Strong transcription HSMM muscle
4 chr15:42501000-42518600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr15:42501000-42518800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:42501000-42520800 Weak transcription Psoas Muscle Psoas
7 chr15:42501000-42534800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr15:42501000-42536600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:42501000-42536800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr15:42501000-42538000 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr15:42501200-42514200 Weak transcription Right Ventricle heart
12 chr15:42501200-42514600 Weak transcription Pancreas Pancrea
13 chr15:42501200-42523200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr15:42501200-42532400 Strong transcription Fetal Muscle Trunk muscle
15 chr15:42501800-42536800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr15:42502000-42521200 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr15:42502000-42535000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr15:42502200-42534000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr15:42502200-42536600 Strong transcription Primary monocytes fromperipheralblood blood
20 chr15:42502400-42519600 Strong transcription Fetal Intestine Large intestine
21 chr15:42502800-42535200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr15:42502800-42536400 Strong transcription Fetal Muscle Leg muscle
23 chr15:42503200-42517600 Weak transcription Gastric stomach
24 chr15:42503200-42544000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr15:42504000-42516200 Weak transcription Esophagus oesophagus
26 chr15:42504000-42516200 Weak transcription A549 lung
27 chr15:42504000-42517800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr15:42505800-42513800 Weak transcription Thymus Thymus
29 chr15:42505800-42514000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr15:42505800-42514200 Weak transcription Aorta Aorta
31 chr15:42505800-42515600 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr15:42505800-42516200 Weak transcription Spleen Spleen
33 chr15:42505800-42516400 Weak transcription Small Intestine intestine
34 chr15:42506800-42532000 Strong transcription Placenta Placenta
35 chr15:42507200-42514000 Weak transcription Left Ventricle heart
36 chr15:42508000-42513600 Strong transcription Brain Anterior Caudate brain
37 chr15:42508000-42532200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
38 chr15:42508200-42520400 Strong transcription Fetal Thymus thymus
39 chr15:42508200-42525000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr15:42508400-42514000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr15:42509400-42535200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr15:42510000-42514000 Weak transcription NHEK skin
43 chr15:42510000-42515800 Weak transcription Muscle Satellite Cultured Cells --
44 chr15:42510400-42513400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr15:42510800-42520200 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr15:42511000-42515600 Weak transcription Ovary ovary
47 chr15:42511200-42514600 Weak transcription Rectal Smooth Muscle rectum
48 chr15:42511400-42514200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr15:42511400-42515200 Weak transcription HSMMtube muscle
50 chr15:42511400-42515400 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015