The 2.0 version of rSNPBase

Variant report

Variant rs2620379
Chromosome Location chr15:42486333-42486334
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42450600-42487400 Strong transcription Primary B cells from cord blood blood
2 chr15:42451000-42487600 Strong transcription Primary T helper cells fromperipheralblood blood
3 chr15:42451200-42487600 Strong transcription Rectal Mucosa Donor 31 rectum
4 chr15:42460000-42499200 Weak transcription A549 lung
5 chr15:42460000-42499800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:42465600-42486400 Weak transcription Fetal Heart heart
7 chr15:42466000-42498800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr15:42475000-42499200 Weak transcription Stomach Mucosa stomach
9 chr15:42476800-42499600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr15:42477200-42497800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr15:42477400-42486400 Strong transcription Primary monocytes fromperipheralblood blood
12 chr15:42477400-42486400 Weak transcription Pancreas Pancrea
13 chr15:42477400-42487400 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr15:42478400-42486800 Weak transcription H9 Cell Line embryonic stem cell
15 chr15:42478400-42498600 Weak transcription Gastric stomach
16 chr15:42480200-42496000 Weak transcription Esophagus oesophagus
17 chr15:42480400-42498600 Weak transcription Small Intestine intestine
18 chr15:42480400-42498800 Weak transcription Right Ventricle heart
19 chr15:42480600-42491400 Weak transcription Psoas Muscle Psoas
20 chr15:42480600-42496000 Weak transcription Spleen Spleen
21 chr15:42481200-42499800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr15:42481400-42489600 Weak transcription Placenta Amnion Placenta Amnion
23 chr15:42481600-42497600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr15:42481600-42497600 Weak transcription HUVEC blood vessel
25 chr15:42481600-42498600 Weak transcription Fetal Brain Male brain
26 chr15:42482800-42499400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr15:42483000-42486400 Weak transcription Fetal Intestine Small intestine
28 chr15:42483200-42499400 Weak transcription H1 Cell Line embryonic stem cell
29 chr15:42483400-42489600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr15:42483400-42498600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr15:42483400-42498600 Weak transcription Fetal Kidney kidney
32 chr15:42483600-42497600 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr15:42483600-42498600 Weak transcription Brain Substantia Nigra brain
34 chr15:42483600-42498600 Weak transcription K562 blood
35 chr15:42483600-42499200 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr15:42483800-42489600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr15:42483800-42489600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr15:42483800-42489600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr15:42483800-42489600 Weak transcription Colon Smooth Muscle Colon
40 chr15:42483800-42492600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr15:42483800-42499400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr15:42484000-42489600 Weak transcription Placenta Placenta
43 chr15:42484000-42489800 Weak transcription NHDF-Ad bronchial
44 chr15:42484000-42499200 Weak transcription HMEC breast
45 chr15:42484200-42486600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr15:42484200-42489600 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr15:42484200-42490000 Weak transcription Rectal Smooth Muscle rectum
48 chr15:42484200-42491600 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr15:42484200-42493400 Weak transcription Muscle Satellite Cultured Cells --
50 chr15:42484400-42486800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015