Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11088437	0.96[ASN][1000 genomes]
rs11701577	0.92[ASN][1000 genomes]
rs11701855	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11702165	0.92[ASN][1000 genomes]
rs2836582	0.86[CEU][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2836598	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2836602	0.96[ASN][1000 genomes]
rs2836610	0.98[ASN][1000 genomes]
rs2836615	0.96[ASN][1000 genomes]
rs2836637	0.83[EUR][1000 genomes]
rs4143428	0.92[ASN][1000 genomes]
rs4514962	0.96[ASN][1000 genomes]
rs55955614	0.94[ASN][1000 genomes]
rs58120977	0.96[ASN][1000 genomes]
rs61189207	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62217513	0.92[ASN][1000 genomes]
rs62217517	0.92[ASN][1000 genomes]
rs62217518	0.92[ASN][1000 genomes]
rs62217519	0.92[ASN][1000 genomes]
rs73902704	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs743444	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8128137	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8130434	0.85[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9647181	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs2836611	CLIC6	cis	cerebellum	SCAN
rs2836611	RUNX1	cis	parietal	SCAN
rs2836611	GUCY1B3	trans	lymphoblastoid	seeQTL

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40040000-40071200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40043800-40048200	Weak transcription	Aorta	Aorta
3	chr21:40044400-40046800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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