Variant report

Variant	rs2836615
Chromosome Location	chr21:40048039-40048040
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11088437	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11700673	0.83[EUR][1000 genomes]
rs11701577	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11701855	0.98[ASN][1000 genomes]
rs11702165	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2212606	0.96[EUR][1000 genomes]
rs2836582	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2836597	0.88[EUR][1000 genomes]
rs2836598	1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2836602	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2836610	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2836611	0.96[ASN][1000 genomes]
rs2836621	0.90[EUR][1000 genomes]
rs2836631	0.82[EUR][1000 genomes]
rs2836633	0.82[EUR][1000 genomes]
rs2836634	0.82[EUR][1000 genomes]
rs2836635	0.82[EUR][1000 genomes]
rs4143428	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4514962	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55955614	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58120977	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61085980	0.91[EUR][1000 genomes]
rs61189207	0.87[ASN][1000 genomes]
rs62217513	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62217517	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62217518	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62217519	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73902704	0.87[ASN][1000 genomes]
rs743444	0.98[ASN][1000 genomes]
rs764482	0.84[EUR][1000 genomes]
rs8128137	0.90[ASN][1000 genomes]
rs8130434	0.96[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8132069	0.82[EUR][1000 genomes]
rs9647181	0.90[ASN][1000 genomes]
rs991816	0.94[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40040000-40071200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40043800-40048200	Weak transcription	Aorta	Aorta
3	chr21:40047400-40048400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr21:40047400-40048600	Bivalent Enhancer	Fetal Stomach	stomach
5	chr21:40047400-40051000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr21:40048000-40049800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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