Variant report
Variant | rs28366377 |
---|---|
Chromosome Location | chr4:166496690-166496691 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10001116 | 0.88[EUR][1000 genomes] |
rs10001551 | 0.88[EUR][1000 genomes] |
rs10003429 | 0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs10006198 | 0.84[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs10018347 | 0.88[EUR][1000 genomes] |
rs10517852 | 0.97[EUR][1000 genomes] |
rs10517854 | 0.80[EUR][1000 genomes] |
rs12331357 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs1459510 | 0.80[EUR][1000 genomes] |
rs1459511 | 0.80[EUR][1000 genomes] |
rs17046758 | 0.84[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs17046824 | 0.80[EUR][1000 genomes] |
rs17046826 | 0.80[EUR][1000 genomes] |
rs17046827 | 0.80[EUR][1000 genomes] |
rs17503409 | 0.80[EUR][1000 genomes] |
rs17503436 | 0.80[EUR][1000 genomes] |
rs17503589 | 0.80[EUR][1000 genomes] |
rs17503652 | 0.80[EUR][1000 genomes] |
rs17587826 | 0.88[EUR][1000 genomes] |
rs17587847 | 0.80[EUR][1000 genomes] |
rs17587875 | 0.80[EUR][1000 genomes] |
rs17587980 | 0.80[EUR][1000 genomes] |
rs17588001 | 0.80[EUR][1000 genomes] |
rs17588022 | 0.80[EUR][1000 genomes] |
rs17588043 | 0.80[EUR][1000 genomes] |
rs28493919 | 0.80[EUR][1000 genomes] |
rs28537958 | 0.80[EUR][1000 genomes] |
rs28569800 | 0.80[EUR][1000 genomes] |
rs28581927 | 0.80[EUR][1000 genomes] |
rs28630955 | 0.80[EUR][1000 genomes] |
rs28654153 | 0.91[AFR][1000 genomes];0.88[EUR][1000 genomes] |
rs28673221 | 0.84[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs4543072 | 0.80[EUR][1000 genomes] |
rs6536921 | 0.90[EUR][1000 genomes] |
rs72689403 | 0.80[EUR][1000 genomes] |
rs72689404 | 0.80[EUR][1000 genomes] |
rs72689405 | 0.80[EUR][1000 genomes] |
rs72689409 | 0.80[EUR][1000 genomes] |
rs72689410 | 0.80[EUR][1000 genomes] |
rs72689413 | 0.80[EUR][1000 genomes] |
rs72689414 | 0.80[EUR][1000 genomes] |
rs72689415 | 0.80[EUR][1000 genomes] |
rs72689416 | 0.80[EUR][1000 genomes] |
rs72689419 | 0.80[EUR][1000 genomes] |
rs72689420 | 0.80[EUR][1000 genomes] |
rs72689423 | 0.80[EUR][1000 genomes] |
rs72689424 | 0.80[EUR][1000 genomes] |
rs72689425 | 0.80[EUR][1000 genomes] |
rs72689427 | 0.80[EUR][1000 genomes] |
rs72689428 | 0.80[EUR][1000 genomes] |
rs72705441 | 0.88[EUR][1000 genomes] |
rs72705449 | 0.88[EUR][1000 genomes] |
rs72705451 | 0.82[EUR][1000 genomes] |
rs72705452 | 0.82[EUR][1000 genomes] |
rs72705454 | 0.80[EUR][1000 genomes] |
rs72705456 | 0.80[EUR][1000 genomes] |
rs72705458 | 0.80[EUR][1000 genomes] |
rs72705460 | 0.80[EUR][1000 genomes] |
rs9996760 | 0.80[EUR][1000 genomes] |
rs9999778 | 0.80[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:166489000-166500800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr4:166494800-166500600 | Weak transcription | HMEC | breast |