Variant report

Variant	rs28654153
Chromosome Location	chr4:166496042-166496043
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs10001116	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10001551	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10003429	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10006198	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10018347	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10034270	0.83[EUR][1000 genomes]
rs10517852	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10517853	0.80[EUR][1000 genomes]
rs10517854	0.92[EUR][1000 genomes]
rs12331357	0.85[EUR][1000 genomes]
rs13134998	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1459510	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1459511	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17046758	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17046824	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17046826	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17046827	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17046853	0.83[EUR][1000 genomes]
rs17503409	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17503436	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17503589	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17503652	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17587826	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17587847	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17587875	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17587980	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17588001	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17588022	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17588043	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17588175	0.90[EUR][1000 genomes]
rs17632054	0.89[EUR][1000 genomes]
rs1914845	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1996567	0.85[EUR][1000 genomes]
rs2322119	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28366377	0.91[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs28493919	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28537958	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28569800	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28581927	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28630955	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28673221	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4543072	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59204772	0.83[EUR][1000 genomes]
rs6536921	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6837884	0.83[EUR][1000 genomes]
rs6854166	0.83[EUR][1000 genomes]
rs72689403	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689404	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689405	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689406	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689409	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689410	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689413	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689414	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689415	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689416	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689419	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689420	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689422	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689423	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689424	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689425	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689427	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689428	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72689439	0.89[EUR][1000 genomes]
rs72689440	0.89[EUR][1000 genomes]
rs72689441	0.89[EUR][1000 genomes]
rs72689442	0.89[EUR][1000 genomes]
rs72689444	0.80[EUR][1000 genomes]
rs72705441	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72705449	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72705451	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72705452	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72705454	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72705456	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72705458	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72705460	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9308109	0.83[EUR][1000 genomes]
rs9996760	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9999778	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166489000-166500800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:166494800-166500600	Weak transcription	HMEC	breast

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