The 2.0 version of rSNPBase

Variant report

Variant rs28429826
Chromosome Location chr16:69906990-69906991
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69834000-69910600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr16:69890400-69923400 Weak transcription HUVEC blood vessel
3 chr16:69893000-69907000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr16:69893000-69934800 Weak transcription Hela-S3 cervix
5 chr16:69893200-69923000 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr16:69893600-69910600 Weak transcription A549 lung
7 chr16:69895800-69907000 Weak transcription Small Intestine intestine
8 chr16:69896000-69909400 Weak transcription Fetal Kidney kidney
9 chr16:69896400-69910000 Weak transcription Fetal Lung lung
10 chr16:69896600-69909200 Strong transcription Fetal Intestine Small intestine
11 chr16:69896600-69910200 Weak transcription Rectal Smooth Muscle rectum
12 chr16:69896800-69907200 Weak transcription Right Atrium heart
13 chr16:69900000-69914600 Weak transcription NHLF lung
14 chr16:69900200-69910000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr16:69900200-69914600 Weak transcription NH-A brain
16 chr16:69900800-69915600 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr16:69900800-69933400 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr16:69901000-69910000 Strong transcription Primary monocytes fromperipheralblood blood
19 chr16:69901000-69910600 Strong transcription Primary neutrophils fromperipheralblood blood
20 chr16:69901000-69910600 Strong transcription Duodenum Mucosa Duodenum
21 chr16:69901000-69912600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr16:69901000-69915200 Strong transcription Primary B cells from peripheral blood blood
23 chr16:69901000-69915200 Strong transcription Primary T cells from cord blood blood
24 chr16:69901000-69918800 Strong transcription Fetal Intestine Large intestine
25 chr16:69901200-69909600 Strong transcription Primary B cells from cord blood blood
26 chr16:69901200-69910200 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr16:69901800-69907400 Weak transcription K562 blood
28 chr16:69901800-69922000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr16:69901800-69924600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr16:69902000-69910800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr16:69902000-69912400 Strong transcription Primary T helper naive cells fromperipheralblood blood
32 chr16:69902600-69914400 Weak transcription HSMM muscle
33 chr16:69902600-69924800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr16:69902800-69910800 Weak transcription Fetal Heart heart
35 chr16:69903200-69912800 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr16:69903600-69910200 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr16:69903800-69909800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr16:69903800-69917600 Strong transcription Primary T cells fromperipheralblood blood
39 chr16:69904200-69951200 Weak transcription H9 Cell Line embryonic stem cell
40 chr16:69904400-69908400 Strong transcription Spleen Spleen
41 chr16:69904400-69909000 Strong transcription Primary T helper naive cells from peripheral blood blood
42 chr16:69904400-69910400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr16:69904400-69911600 Strong transcription Fetal Thymus thymus
44 chr16:69904400-69911800 Strong transcription Thymus Thymus
45 chr16:69904600-69910600 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr16:69904800-69910400 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr16:69904800-69911000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr16:69904800-69915000 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr16:69905000-69908200 Strong transcription Brain Hippocampus Middle brain
50 chr16:69905000-69908800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015