The 2.0 version of rSNPBase

Variant report

Variant rs28523536
Chromosome Location chr16:69801435-69801436
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69797000-69802600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr16:69797200-69803800 Weak transcription Lung lung
3 chr16:69797200-69806200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr16:69797200-69807000 Weak transcription Esophagus oesophagus
5 chr16:69797200-69807000 Weak transcription Fetal Muscle Trunk muscle
6 chr16:69797200-69809800 Weak transcription Small Intestine intestine
7 chr16:69797400-69806400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr16:69797400-69806400 Weak transcription Brain Substantia Nigra brain
9 chr16:69797400-69806600 Weak transcription Brain Angular Gyrus brain
10 chr16:69797400-69821200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr16:69797600-69806400 Weak transcription HSMM muscle
12 chr16:69797600-69806600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr16:69797600-69808200 Weak transcription Primary T cells from cord blood blood
14 chr16:69797600-69816800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr16:69797600-69853400 Weak transcription Placenta Amnion Placenta Amnion
16 chr16:69797800-69802600 Weak transcription Thymus Thymus
17 chr16:69797800-69802800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr16:69797800-69803600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr16:69797800-69804400 Weak transcription Primary B cells from peripheral blood blood
20 chr16:69797800-69806200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr16:69797800-69806200 Weak transcription Hela-S3 cervix
22 chr16:69797800-69806400 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr16:69797800-69806600 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr16:69797800-69806600 Weak transcription Adipose Nuclei Adipose
25 chr16:69797800-69806600 Weak transcription Stomach Smooth Muscle stomach
26 chr16:69797800-69806600 Weak transcription K562 blood
27 chr16:69797800-69806800 Weak transcription NH-A brain
28 chr16:69797800-69809200 Weak transcription Brain Cingulate Gyrus brain
29 chr16:69797800-69809200 Weak transcription A549 lung
30 chr16:69797800-69809800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr16:69797800-69821200 Weak transcription Rectal Smooth Muscle rectum
32 chr16:69798000-69802200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr16:69798000-69804400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr16:69798000-69804800 Weak transcription Primary B cells from cord blood blood
35 chr16:69798000-69806400 Weak transcription Primary monocytes fromperipheralblood blood
36 chr16:69798000-69806400 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr16:69798000-69806400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr16:69798000-69806400 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr16:69798000-69806600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr16:69798000-69806600 Weak transcription HSMMtube muscle
41 chr16:69798000-69809200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr16:69798000-69809400 Weak transcription Dnd41 blood
43 chr16:69798000-69810000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr16:69798200-69805400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr16:69798200-69805600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr16:69798400-69803600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr16:69798400-69804000 Weak transcription Primary T cells fromperipheralblood blood
48 chr16:69798400-69806400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr16:69798600-69806400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr16:69799800-69803800 Enhancers HepG2 liver

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Last update: Aug 31, 2015