The 2.0 version of rSNPBase

Variant report

Variant rs28607148
Chromosome Location chr16:69606698-69606699
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69601400-69613000 Weak transcription Small Intestine intestine
2 chr16:69601600-69610600 Weak transcription Ovary ovary
3 chr16:69601800-69610600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr16:69602000-69610600 Weak transcription Placenta Amnion Placenta Amnion
5 chr16:69602000-69633000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr16:69602200-69609200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr16:69602200-69610400 Weak transcription Placenta Placenta
8 chr16:69602200-69610400 Weak transcription Lung lung
9 chr16:69602200-69619400 Weak transcription Duodenum Mucosa Duodenum
10 chr16:69602200-69622000 Weak transcription Gastric stomach
11 chr16:69602200-69627000 Weak transcription Primary T cells fromperipheralblood blood
12 chr16:69602200-69628600 Weak transcription Right Atrium heart
13 chr16:69602200-69631600 Weak transcription Pancreas Pancrea
14 chr16:69602200-69643200 Weak transcription Fetal Muscle Leg muscle
15 chr16:69602200-69646600 Weak transcription Primary hematopoietic stem cells blood
16 chr16:69602200-69653600 Weak transcription Fetal Thymus thymus
17 chr16:69602400-69610400 Weak transcription Psoas Muscle Psoas
18 chr16:69602600-69607600 Weak transcription Fetal Intestine Small intestine
19 chr16:69602600-69609000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr16:69602600-69610600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr16:69602600-69614200 Weak transcription Fetal Stomach stomach
22 chr16:69602600-69628600 Weak transcription Thymus Thymus
23 chr16:69602600-69628800 Weak transcription Right Ventricle heart
24 chr16:69602600-69629600 Weak transcription HSMMtube muscle
25 chr16:69602600-69630200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr16:69602600-69630800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr16:69602800-69608800 Weak transcription Fetal Intestine Large intestine
28 chr16:69602800-69610200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr16:69602800-69611400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr16:69602800-69627800 Weak transcription Fetal Kidney kidney
31 chr16:69602800-69629200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr16:69603000-69610600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr16:69603000-69613400 Weak transcription Fetal Heart heart
34 chr16:69603000-69617400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr16:69603000-69627800 Weak transcription Brain Substantia Nigra brain
36 chr16:69603000-69647400 Weak transcription Stomach Smooth Muscle stomach
37 chr16:69603200-69606800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr16:69603200-69610600 Weak transcription Brain Angular Gyrus brain
39 chr16:69603200-69612000 Weak transcription Brain Cingulate Gyrus brain
40 chr16:69603200-69627800 Weak transcription Primary B cells from cord blood blood
41 chr16:69603200-69629600 Weak transcription NH-A brain
42 chr16:69603400-69614600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr16:69603400-69617200 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr16:69603400-69623600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr16:69603600-69607200 Weak transcription Dnd41 blood
46 chr16:69603600-69608000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr16:69603600-69610400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr16:69603600-69610400 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr16:69603600-69611400 Weak transcription Adipose Nuclei Adipose
50 chr16:69603600-69619400 Weak transcription K562 blood

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Last update: Aug 31, 2015