The 2.0 version of rSNPBase

Variant report

Variant rs28535427
Chromosome Location chr16:69613852-69613853
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69602000-69633000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr16:69602200-69619400 Weak transcription Duodenum Mucosa Duodenum
3 chr16:69602200-69622000 Weak transcription Gastric stomach
4 chr16:69602200-69627000 Weak transcription Primary T cells fromperipheralblood blood
5 chr16:69602200-69628600 Weak transcription Right Atrium heart
6 chr16:69602200-69631600 Weak transcription Pancreas Pancrea
7 chr16:69602200-69643200 Weak transcription Fetal Muscle Leg muscle
8 chr16:69602200-69646600 Weak transcription Primary hematopoietic stem cells blood
9 chr16:69602200-69653600 Weak transcription Fetal Thymus thymus
10 chr16:69602600-69614200 Weak transcription Fetal Stomach stomach
11 chr16:69602600-69628600 Weak transcription Thymus Thymus
12 chr16:69602600-69628800 Weak transcription Right Ventricle heart
13 chr16:69602600-69629600 Weak transcription HSMMtube muscle
14 chr16:69602600-69630200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr16:69602600-69630800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr16:69602800-69627800 Weak transcription Fetal Kidney kidney
17 chr16:69602800-69629200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr16:69603000-69617400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr16:69603000-69627800 Weak transcription Brain Substantia Nigra brain
20 chr16:69603000-69647400 Weak transcription Stomach Smooth Muscle stomach
21 chr16:69603200-69627800 Weak transcription Primary B cells from cord blood blood
22 chr16:69603200-69629600 Weak transcription NH-A brain
23 chr16:69603400-69614600 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr16:69603400-69617200 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr16:69603400-69623600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr16:69603600-69619400 Weak transcription K562 blood
27 chr16:69603600-69625200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr16:69603600-69627000 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr16:69603600-69629200 Weak transcription HUVEC blood vessel
30 chr16:69603600-69660000 Weak transcription Primary B cells from peripheral blood blood
31 chr16:69604000-69616400 Weak transcription Hela-S3 cervix
32 chr16:69604000-69620000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr16:69604000-69627800 Weak transcription Fetal Lung lung
34 chr16:69604000-69628000 Weak transcription Primary T cells from cord blood blood
35 chr16:69604000-69629000 Weak transcription NHLF lung
36 chr16:69604200-69614400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr16:69604400-69614400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr16:69604400-69619200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr16:69604800-69614400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr16:69605200-69614800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr16:69605200-69616400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr16:69605400-69619400 Weak transcription Rectal Smooth Muscle rectum
43 chr16:69605400-69629200 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr16:69605400-69663200 Weak transcription Fetal Muscle Trunk muscle
45 chr16:69605600-69660600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr16:69609000-69617200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr16:69609600-69627400 Weak transcription Fetal Intestine Large intestine
48 chr16:69610000-69623400 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr16:69610600-69629200 Weak transcription Aorta Aorta
50 chr16:69610800-69614200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015