The 2.0 version of rSNPBase

Variant report

Variant rs28610117
Chromosome Location chr16:69837546-69837547
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69797600-69853400 Weak transcription Placenta Amnion Placenta Amnion
2 chr16:69807200-69852400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr16:69807200-69852800 Weak transcription Hela-S3 cervix
4 chr16:69807200-69854800 Weak transcription Psoas Muscle Psoas
5 chr16:69810000-69839800 Weak transcription HUVEC blood vessel
6 chr16:69817800-69854600 Weak transcription HMEC breast
7 chr16:69820200-69845000 Weak transcription K562 blood
8 chr16:69822400-69854800 Weak transcription Stomach Mucosa stomach
9 chr16:69823800-69874800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr16:69824200-69852400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr16:69830000-69839000 Strong transcription HepG2 liver
12 chr16:69830200-69856600 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr16:69830600-69838400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr16:69830600-69857600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
15 chr16:69830600-69864200 Weak transcription Colon Smooth Muscle Colon
16 chr16:69830600-69867000 Weak transcription Right Ventricle heart
17 chr16:69831000-69845000 Weak transcription Fetal Brain Male brain
18 chr16:69831000-69845600 Weak transcription A549 lung
19 chr16:69831000-69852400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr16:69831000-69852400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr16:69831000-69854800 Weak transcription Aorta Aorta
22 chr16:69831000-69856400 Strong transcription Primary monocytes fromperipheralblood blood
23 chr16:69831200-69846200 Strong transcription Fetal Intestine Small intestine
24 chr16:69831600-69838800 Strong transcription Duodenum Mucosa Duodenum
25 chr16:69832000-69837800 Strong transcription Primary T helper naive cells fromperipheralblood blood
26 chr16:69832000-69838800 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr16:69832400-69858400 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr16:69832600-69837600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr16:69832600-69837800 Strong transcription Sigmoid Colon Sigmoid Colon
30 chr16:69832600-69838000 Strong transcription Primary T cells from cord blood blood
31 chr16:69832600-69838200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr16:69832600-69840000 Strong transcription Fetal Intestine Large intestine
33 chr16:69832600-69840400 Strong transcription Primary B cells from peripheral blood blood
34 chr16:69832800-69837800 Strong transcription Thymus Thymus
35 chr16:69833000-69837800 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr16:69833200-69854800 Weak transcription NH-A brain
37 chr16:69833400-69852400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr16:69833400-69854600 Weak transcription Muscle Satellite Cultured Cells --
39 chr16:69833400-69854600 Weak transcription NHLF lung
40 chr16:69833600-69845600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr16:69833600-69847800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr16:69833800-69843000 Weak transcription Esophagus oesophagus
43 chr16:69833800-69844000 Weak transcription Pancreas Pancrea
44 chr16:69833800-69847800 Weak transcription Adipose Nuclei Adipose
45 chr16:69833800-69854400 Weak transcription Osteobl bone
46 chr16:69833800-69854600 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr16:69833800-69854800 Weak transcription HSMM muscle
48 chr16:69833800-69854800 Weak transcription HSMMtube muscle
49 chr16:69833800-69857600 Weak transcription Small Intestine intestine
50 chr16:69833800-69864400 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015