Variant report

Variant	rs28446748
Chromosome Location	chr4:125551316-125551317
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:125539904..125542876-chr4:125550211..125552589,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10026096	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13434506	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13435256	0.87[ASN][1000 genomes]
rs17008483	0.87[ASN][1000 genomes]
rs17008497	0.87[ASN][1000 genomes]
rs2055274	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28570281	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28593722	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28691726	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2893092	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3733472	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4410542	0.87[ASN][1000 genomes]
rs72925412	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72925417	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72925427	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72925486	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72925494	0.87[ASN][1000 genomes]
rs72925502	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72927437	0.87[ASN][1000 genomes]
rs870741	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125523800-125552800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr4:125524800-125553000	Weak transcription	HSMMtube	muscle
3	chr4:125536600-125552600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr4:125539000-125561200	Weak transcription	Ovary	ovary
5	chr4:125539200-125572400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr4:125539400-125552200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr4:125540000-125590200	Weak transcription	Aorta	Aorta
8	chr4:125543600-125584200	Weak transcription	Fetal Muscle Trunk	muscle
9	chr4:125544600-125553200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr4:125544800-125553000	Weak transcription	Fetal Stomach	stomach
11	chr4:125544800-125553200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr4:125545000-125572400	Weak transcription	Left Ventricle	heart
13	chr4:125545200-125552800	Weak transcription	HSMM	muscle
14	chr4:125547000-125571400	Weak transcription	Fetal Muscle Leg	muscle
15	chr4:125548200-125553000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr4:125548400-125553200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr4:125549000-125552000	Weak transcription	HUVEC	blood vessel
18	chr4:125549000-125552800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr4:125549200-125552600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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