The 2.0 version of rSNPBase

Variant report

Variant rs13435256
Chromosome Location chr4:125619501-125619502
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:125593000-125621800 Weak transcription Fetal Stomach stomach
2 chr4:125593000-125631200 Weak transcription Esophagus oesophagus
3 chr4:125593400-125621800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr4:125593400-125629800 Weak transcription Aorta Aorta
5 chr4:125593400-125629800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr4:125593400-125631200 Weak transcription Thymus Thymus
7 chr4:125593600-125629600 Weak transcription HSMMtube muscle
8 chr4:125593600-125631000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr4:125594200-125625400 Weak transcription Hela-S3 cervix
10 chr4:125594200-125631200 Weak transcription Fetal Thymus thymus
11 chr4:125597400-125631200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr4:125599200-125627800 Weak transcription Placenta Placenta
13 chr4:125601600-125621200 Weak transcription Fetal Heart heart
14 chr4:125606000-125624400 Weak transcription Fetal Brain Male brain
15 chr4:125606000-125631000 Weak transcription Placenta Amnion Placenta Amnion
16 chr4:125606200-125629600 Weak transcription K562 blood
17 chr4:125606400-125621800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:125607800-125621200 Weak transcription NH-A brain
19 chr4:125607800-125631200 Weak transcription Left Ventricle heart
20 chr4:125608000-125621200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr4:125608200-125621800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:125608200-125629800 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr4:125608400-125621400 Weak transcription Muscle Satellite Cultured Cells --
24 chr4:125610600-125621200 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr4:125611400-125629800 Weak transcription Fetal Kidney kidney
26 chr4:125611600-125632400 Weak transcription Stomach Mucosa stomach
27 chr4:125614200-125621200 Weak transcription HSMM muscle
28 chr4:125614400-125621200 Weak transcription Primary hematopoietic stem cells blood
29 chr4:125616000-125625000 Weak transcription Rectal Smooth Muscle rectum
30 chr4:125616000-125625400 Weak transcription Colon Smooth Muscle Colon
31 chr4:125616600-125631200 Weak transcription Lung lung
32 chr4:125616800-125621800 Weak transcription Ovary ovary
33 chr4:125616800-125624000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr4:125616800-125625400 Weak transcription Liver Liver
35 chr4:125616800-125629600 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr4:125616800-125631200 Weak transcription H9 Cell Line embryonic stem cell
37 chr4:125616800-125631200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr4:125617000-125621200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr4:125617000-125630200 Weak transcription Brain Hippocampus Middle brain
40 chr4:125617400-125619600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
41 chr4:125617800-125621200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:125617800-125621200 Weak transcription Fetal Intestine Large intestine
43 chr4:125617800-125629600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr4:125618200-125619800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
45 chr4:125618200-125620000 ZNF genes & repeats Fetal Muscle Leg muscle
46 chr4:125618200-125621200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr4:125618400-125621000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr4:125618400-125621200 Strong transcription HUVEC blood vessel
49 chr4:125618600-125621200 Strong transcription Fetal Lung lung
50 chr4:125618600-125621800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015