The 2.0 version of rSNPBase

Variant report

Variant rs28477433
Chromosome Location chr4:174085820-174085821
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174055000-174086000 Weak transcription Thymus Thymus
2 chr4:174065200-174087200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:174066800-174089000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr4:174066800-174089000 Weak transcription HSMM muscle
5 chr4:174069200-174088800 Weak transcription HMEC breast
6 chr4:174072200-174089000 Weak transcription Fetal Stomach stomach
7 chr4:174073600-174089000 Weak transcription Pancreas Pancrea
8 chr4:174073600-174089200 Weak transcription Aorta Aorta
9 chr4:174073800-174089000 Weak transcription NHLF lung
10 chr4:174074600-174088800 Weak transcription Fetal Intestine Small intestine
11 chr4:174075400-174088600 Weak transcription Fetal Intestine Large intestine
12 chr4:174075800-174088800 Weak transcription Primary monocytes fromperipheralblood blood
13 chr4:174076400-174088400 Weak transcription Primary T cells from cord blood blood
14 chr4:174076800-174086000 Weak transcription HUVEC blood vessel
15 chr4:174077200-174088800 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr4:174077800-174089000 Weak transcription Primary B cells from peripheral blood blood
17 chr4:174078400-174088800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr4:174079600-174087000 Weak transcription Dnd41 blood
19 chr4:174079600-174087800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr4:174079600-174088800 Weak transcription Rectal Smooth Muscle rectum
21 chr4:174080000-174089000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr4:174081000-174087200 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr4:174081000-174088200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr4:174081000-174088400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr4:174081000-174088800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr4:174081000-174089000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr4:174081200-174089000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:174082200-174086000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:174082200-174088800 Weak transcription H1 Cell Line embryonic stem cell
30 chr4:174082600-174087000 Weak transcription A549 lung
31 chr4:174082800-174086200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr4:174082800-174088000 Weak transcription K562 blood
33 chr4:174083400-174089000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr4:174083600-174086600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr4:174083600-174086800 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr4:174083600-174086800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr4:174083600-174089000 Weak transcription Brain Substantia Nigra brain
38 chr4:174083800-174089000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr4:174084000-174087400 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr4:174084000-174088800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr4:174084200-174089000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr4:174084400-174086000 Strong transcription Fetal Thymus thymus
43 chr4:174084400-174086200 Strong transcription Primary hematopoietic stem cells blood
44 chr4:174084400-174087400 Strong transcription HUES48 Cell Line embryonic stem cell
45 chr4:174084400-174087400 Strong transcription Primary B cells from cord blood blood
46 chr4:174084400-174088000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr4:174084400-174089000 Weak transcription Brain Hippocampus Middle brain
48 chr4:174084800-174088800 Weak transcription Fetal Heart heart
49 chr4:174084800-174089000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr4:174085000-174088800 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015