The 2.0 version of rSNPBase

Variant report

Variant rs28549286
Chromosome Location chr9:100799597-100799598
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100784000-100803800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr9:100785000-100801400 Weak transcription Fetal Intestine Small intestine
3 chr9:100795600-100800200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
4 chr9:100796800-100799600 Enhancers Skeletal Muscle Female skeletal muscle
5 chr9:100797200-100799600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr9:100797200-100799600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr9:100797200-100799800 Weak transcription Primary monocytes fromperipheralblood blood
8 chr9:100797200-100799800 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr9:100797200-100800200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr9:100797200-100800200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr9:100797400-100799600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr9:100797400-100799600 Weak transcription Adipose Nuclei Adipose
13 chr9:100797400-100799600 Weak transcription Colonic Mucosa Colon
14 chr9:100797400-100800000 Weak transcription Primary hematopoietic stem cells blood
15 chr9:100797400-100801200 Weak transcription Duodenum Mucosa Duodenum
16 chr9:100797400-100802000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr9:100797800-100799600 Weak transcription Right Ventricle heart
18 chr9:100797800-100799800 Weak transcription K562 blood
19 chr9:100797800-100800600 Enhancers Skeletal Muscle Male skeletal muscle
20 chr9:100798000-100799600 Weak transcription HSMM muscle
21 chr9:100798000-100799600 Weak transcription NHEK skin
22 chr9:100798000-100799600 Weak transcription NHLF lung
23 chr9:100798000-100799800 Weak transcription Placenta Placenta
24 chr9:100798000-100799800 Weak transcription Osteobl bone
25 chr9:100798000-100800200 Enhancers Muscle Satellite Cultured Cells --
26 chr9:100798000-100801400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr9:100798000-100801800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr9:100798000-100807000 Weak transcription Spleen Spleen
29 chr9:100798000-100807600 Weak transcription HSMMtube muscle
30 chr9:100798200-100799600 Weak transcription HUVEC blood vessel
31 chr9:100798200-100799600 Weak transcription NH-A brain
32 chr9:100798200-100799800 Weak transcription Fetal Muscle Leg muscle
33 chr9:100798200-100801400 Enhancers GM12878-XiMat blood
34 chr9:100798200-100807400 Weak transcription Primary B cells from cord blood blood
35 chr9:100798400-100801200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr9:100798800-100801200 Weak transcription Primary B cells from peripheral blood blood
37 chr9:100799000-100800200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr9:100799000-100800200 Enhancers Right Atrium heart
39 chr9:100799000-100801600 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr9:100799200-100800000 Enhancers Lung lung
41 chr9:100799200-100800200 Enhancers Psoas Muscle Psoas
42 chr9:100799200-100800200 Enhancers Rectal Mucosa Donor 31 rectum
43 chr9:100799200-100800400 Enhancers Left Ventricle heart
44 chr9:100799400-100800000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr9:100799400-100800400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015