Variant report

No.	Distal block	Cell Line	Cell type
1	chr9:100679327..100688755-chr9:100804829..100810921,12	K562	blood:
2	chr9:100743537..100749297-chr9:100805473..100813198,12	K562	blood:
3	chr9:100799367..100802266-chr9:100805470..100807708,2	MCF-7	breast:
4	chr9:100803503..100806202-chr9:100818187..100820098,2	MCF-7	breast:
5	chr9:100744535..100746584-chr9:100805455..100807504,2	MCF-7	breast:
6	chr9:100685001..100687073-chr9:100804782..100806329,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10081625	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10081626	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10283632	0.87[EUR][1000 genomes]
rs10283737	0.92[EUR][1000 genomes]
rs10984650	0.86[EUR][1000 genomes]
rs10984775	0.87[EUR][1000 genomes]
rs10984811	0.92[EUR][1000 genomes]
rs10984822	0.91[EUR][1000 genomes]
rs10984829	0.91[EUR][1000 genomes]
rs10984862	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12336903	0.86[EUR][1000 genomes]
rs12338164	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12343945	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13290142	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28459874	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28549286	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28576751	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28660049	0.87[EUR][1000 genomes]
rs28715400	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs66865656	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7861102	0.85[EUR][1000 genomes]
rs872251	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482635	chr9:100775549-100953239	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100798000-100807000	Weak transcription	Spleen	Spleen
2	chr9:100798000-100807600	Weak transcription	HSMMtube	muscle
3	chr9:100798200-100807400	Weak transcription	Primary B cells from cord blood	blood
4	chr9:100800200-100807000	Weak transcription	K562	blood
5	chr9:100800400-100806200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr9:100801600-100806000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr9:100801800-100807400	Weak transcription	HSMM	muscle
8	chr9:100802400-100809600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr9:100802800-100807600	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr9:100804800-100807800	Enhancers	Primary B cells from peripheral blood	blood
11	chr9:100805000-100806000	Weak transcription	Primary hematopoietic stem cells	blood
12	chr9:100805200-100807000	Enhancers	GM12878-XiMat	blood
13	chr9:100805800-100806200	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr9:100805800-100807400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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