Variant report
Variant | rs28590718 |
---|---|
Chromosome Location | chr8:85232019-85232020 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:85229678..85232410-chr8:85340813..85342661,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10094547 | 1.00[ASN][1000 genomes] |
rs10095560 | 0.90[EUR][1000 genomes] |
rs10111128 | 0.90[EUR][1000 genomes] |
rs16912615 | 1.00[ASN][1000 genomes] |
rs16912698 | 1.00[ASN][1000 genomes] |
rs1873562 | 1.00[ASN][1000 genomes] |
rs28379366 | 0.85[EUR][1000 genomes] |
rs28380661 | 0.82[EUR][1000 genomes] |
rs28459024 | 0.90[EUR][1000 genomes] |
rs28722870 | 0.90[EUR][1000 genomes] |
rs58308118 | 0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60228936 | 1.00[ASN][1000 genomes] |
rs60747099 | 1.00[ASN][1000 genomes] |
rs6984895 | 0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6995039 | 1.00[ASN][1000 genomes] |
rs73293008 | 1.00[ASN][1000 genomes] |
rs73306923 | 1.00[ASN][1000 genomes] |
rs73306962 | 1.00[ASN][1000 genomes] |
rs7831643 | 1.00[ASN][1000 genomes] |
rs9632839 | 0.85[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2753846 | chr8:84637092-85239703 | Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
2 | nsv831374 | chr8:85103604-85308976 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
3 | esv1842719 | chr8:85198548-85268951 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | n/a |
4 | nsv1028784 | chr8:85215670-85268654 | Enhancers Weak transcription ZNF genes & repeats Active TSS | Chromatin interactive region | n/a | inside rSNPs | n/a |
5 | nsv1034144 | chr8:85230634-85268654 | Enhancers Weak transcription ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:85232000-85233000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |