Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10094547	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10095560	0.92[EUR][1000 genomes]
rs10111128	0.92[EUR][1000 genomes]
rs16912615	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16912698	1.00[ASN][1000 genomes]
rs1873562	1.00[ASN][1000 genomes]
rs28379366	0.87[EUR][1000 genomes]
rs28380661	0.84[EUR][1000 genomes]
rs28459024	0.92[EUR][1000 genomes]
rs28590718	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28722870	0.92[EUR][1000 genomes]
rs58308118	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60228936	1.00[ASN][1000 genomes]
rs60747099	1.00[ASN][1000 genomes]
rs6995039	1.00[ASN][1000 genomes]
rs73293008	1.00[ASN][1000 genomes]
rs73306923	1.00[ASN][1000 genomes]
rs73306962	1.00[ASN][1000 genomes]
rs7831643	1.00[ASN][1000 genomes]
rs9632839	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753846	chr8:84637092-85239703	Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831374	chr8:85103604-85308976	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1842719	chr8:85198548-85268951	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85199400-85205800	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr8:85199800-85204000	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr8:85200400-85206400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr8:85200600-85206800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr8:85201000-85202600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr8:85201000-85203200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr8:85201000-85205600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr8:85201200-85202600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
9	chr8:85201200-85203600	Enhancers	Fetal Lung	lung
10	chr8:85201400-85203400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr8:85201400-85203600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr8:85201800-85203800	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr8:85201800-85204000	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr8:85201800-85206200	Weak transcription	Liver	Liver
15	chr8:85202000-85202600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
16	chr8:85202200-85203600	Enhancers	H1 Cell Line	embryonic stem cell
17	chr8:85202400-85202600	Enhancers	H9 Cell Line	embryonic stem cell

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