The 2.0 version of rSNPBase

Variant report

Variant rs28989231
Chromosome Location chr4:144309692-144309693
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144302800-144312600 Weak transcription Placenta Placenta
2 chr4:144303000-144312000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:144303000-144318000 Weak transcription HSMM muscle
4 chr4:144303200-144311800 Weak transcription Brain Germinal Matrix brain
5 chr4:144303200-144312000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr4:144303200-144317800 Weak transcription Gastric stomach
7 chr4:144303400-144312000 Weak transcription H1 Cell Line embryonic stem cell
8 chr4:144303400-144312600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr4:144303400-144326600 Weak transcription Colonic Mucosa Colon
10 chr4:144304000-144310200 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr4:144304000-144310600 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr4:144304000-144310600 Weak transcription Hela-S3 cervix
13 chr4:144304200-144320000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr4:144304400-144312000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr4:144304600-144310000 Weak transcription HMEC breast
16 chr4:144304600-144310000 Weak transcription NHEK skin
17 chr4:144304600-144311200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr4:144304600-144312600 Weak transcription HSMMtube muscle
19 chr4:144304600-144317000 Weak transcription K562 blood
20 chr4:144305200-144310200 Weak transcription Liver Liver
21 chr4:144305200-144311000 Weak transcription Primary monocytes fromperipheralblood blood
22 chr4:144305200-144311800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr4:144305200-144311800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:144305800-144310600 Weak transcription Fetal Stomach stomach
25 chr4:144306000-144310000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr4:144306000-144312000 Weak transcription Fetal Muscle Trunk muscle
27 chr4:144306000-144312000 Weak transcription Fetal Muscle Leg muscle
28 chr4:144306000-144312000 Weak transcription Pancreas Pancrea
29 chr4:144306200-144310200 Weak transcription Muscle Satellite Cultured Cells --
30 chr4:144306200-144311000 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr4:144306200-144311200 Enhancers Brain Angular Gyrus brain
32 chr4:144306400-144310000 Weak transcription Osteobl bone
33 chr4:144306600-144310400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr4:144306600-144310400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr4:144306600-144310600 Weak transcription Adipose Nuclei Adipose
36 chr4:144306600-144312000 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr4:144306600-144318000 Weak transcription Aorta Aorta
38 chr4:144306800-144310000 Weak transcription Fetal Kidney kidney
39 chr4:144306800-144310000 Weak transcription Rectal Smooth Muscle rectum
40 chr4:144306800-144310000 Weak transcription NHLF lung
41 chr4:144306800-144310200 Enhancers Left Ventricle heart
42 chr4:144306800-144310400 Weak transcription Stomach Smooth Muscle stomach
43 chr4:144306800-144310600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr4:144307000-144310000 Weak transcription NHDF-Ad bronchial
45 chr4:144307000-144310200 Weak transcription Colon Smooth Muscle Colon
46 chr4:144307000-144311800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr4:144307200-144310200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr4:144307200-144310600 Weak transcription Small Intestine intestine
49 chr4:144307400-144312000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr4:144307400-144323600 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015