Variant report

Variant	rs2911858
Chromosome Location	chr10:95763857-95763858
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:95763392..95765244-chr10:95925662..95928530,2	MCF-7	breast:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1096044	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1223580	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1223583	0.87[ASN][1000 genomes]
rs1223584	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1223585	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1223586	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1223587	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1223588	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1223590	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1223612	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1223613	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1223614	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1223615	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1223616	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1223617	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1223618	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1425300	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1648001	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1776842	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1776865	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1935959	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1954345	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1954346	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4359134	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7068499	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs829226	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs829228	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs829229	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs829232	0.87[ASN][1000 genomes]

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95756200-95766600	Weak transcription	Pancreas	Pancrea
2	chr10:95757800-95764200	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr10:95759000-95766600	Enhancers	HSMM	muscle
4	chr10:95759400-95766800	Weak transcription	Fetal Kidney	kidney
5	chr10:95759800-95764200	Weak transcription	Colonic Mucosa	Colon
6	chr10:95759800-95764800	Weak transcription	Small Intestine	intestine
7	chr10:95759800-95765400	Weak transcription	Aorta	Aorta
8	chr10:95759800-95766200	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr10:95760000-95764200	Enhancers	HSMMtube	muscle
10	chr10:95760200-95765200	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr10:95760400-95765200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr10:95760600-95765000	Weak transcription	NH-A	brain
13	chr10:95760800-95765200	Weak transcription	Gastric	stomach
14	chr10:95760800-95766000	Weak transcription	Fetal Lung	lung
15	chr10:95760800-95766400	Weak transcription	Fetal Heart	heart
16	chr10:95760800-95768400	Weak transcription	Fetal Muscle Trunk	muscle
17	chr10:95761000-95766000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr10:95761000-95766000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr10:95761200-95764000	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr10:95761200-95764800	Weak transcription	Osteobl	bone
21	chr10:95761200-95765200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr10:95761200-95766200	Weak transcription	Adipose Nuclei	Adipose
23	chr10:95761200-95766400	Weak transcription	Ovary	ovary
24	chr10:95761800-95764400	Weak transcription	Fetal Intestine Large	intestine
25	chr10:95761800-95764800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr10:95761800-95771600	Weak transcription	Right Atrium	heart
27	chr10:95762000-95764400	Weak transcription	Duodenum Mucosa	Duodenum
28	chr10:95762000-95766400	Weak transcription	Psoas Muscle	Psoas
29	chr10:95762200-95764000	Weak transcription	Esophagus	oesophagus
30	chr10:95762200-95764200	Weak transcription	Fetal Intestine Small	intestine
31	chr10:95762200-95764200	Weak transcription	A549	lung
32	chr10:95762200-95764600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr10:95762200-95764800	Weak transcription	Stomach Mucosa	stomach
34	chr10:95762200-95765000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr10:95762600-95765800	Weak transcription	Muscle Satellite Cultured Cells	--
36	chr10:95762600-95766400	Weak transcription	Skeletal Muscle Male	skeletal muscle
37	chr10:95763200-95765400	Weak transcription	Skeletal Muscle Female	skeletal muscle
38	chr10:95763600-95764000	Weak transcription	Rectal Mucosa Donor 31	rectum
39	chr10:95763600-95764200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
40	chr10:95763600-95764200	Weak transcription	Fetal Muscle Leg	muscle

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