Variant report

Variant rs2974454
Chromosome Location chr5:61030954-61030955
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61027400-61032400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr5:61027800-61032400 Weak transcription H9 Cell Line embryonic stem cell
3 chr5:61029000-61031200 Weak transcription HSMM muscle
4 chr5:61029000-61031800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr5:61029000-61032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:61029000-61032200 Weak transcription H1 Cell Line embryonic stem cell
7 chr5:61029000-61032200 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr5:61029000-61032200 Weak transcription Fetal Muscle Trunk muscle
9 chr5:61029000-61032400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr5:61029000-61035800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr5:61029000-61040000 Weak transcription Pancreas Pancrea
12 chr5:61029200-61031400 Weak transcription Fetal Brain Male brain
13 chr5:61029200-61031400 Weak transcription Fetal Lung lung
14 chr5:61029200-61032000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr5:61029200-61032000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr5:61029200-61032000 Weak transcription Fetal Brain Female brain
17 chr5:61029200-61032200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:61029200-61032200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:61029200-61032400 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr5:61029400-61032000 Weak transcription Brain Angular Gyrus brain
21 chr5:61029400-61032200 Weak transcription Brain Cingulate Gyrus brain
22 chr5:61029400-61032200 Weak transcription Brain Substantia Nigra brain
23 chr5:61029400-61032400 Weak transcription Brain Hippocampus Middle brain
24 chr5:61029400-61032400 Weak transcription Fetal Stomach stomach
25 chr5:61029600-61031400 Weak transcription Brain Anterior Caudate brain
26 chr5:61029600-61031600 Weak transcription Brain Germinal Matrix brain
27 chr5:61029600-61032200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr5:61029800-61031400 Enhancers Liver Liver
29 chr5:61029800-61033200 Enhancers NHDF-Ad bronchial
30 chr5:61030000-61033600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr5:61030200-61031400 Weak transcription Fetal Kidney kidney
32 chr5:61030400-61031400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:61030400-61032600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr5:61030600-61031800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr5:61030600-61032200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr5:61030800-61031000 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr5:61030800-61031400 Weak transcription Ovary ovary
38 chr5:61030800-61031400 Weak transcription HSMMtube muscle
39 chr5:61030800-61033600 Enhancers Muscle Satellite Cultured Cells --

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