Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:61002483..61004885-chr5:61012609..61014219,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1466011	0.92[ASN][1000 genomes]
rs1466012	0.92[ASN][1000 genomes]
rs149080	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs149127	0.92[ASN][1000 genomes]
rs149328	0.92[ASN][1000 genomes]
rs153375	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153377	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs153378	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153381	0.92[ASN][1000 genomes]
rs153382	0.92[ASN][1000 genomes]
rs153384	0.85[CEU][hapmap];0.81[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs153428	1.00[ASN][1000 genomes]
rs1580860	0.85[CEU][hapmap]
rs253180	0.85[CEU][hapmap];0.81[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs253532	1.00[CEU][hapmap];0.81[CHB][hapmap];0.94[JPT][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs253535	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2937832	0.81[CHB][hapmap];0.94[JPT][hapmap]
rs2937834	0.86[ASN][1000 genomes]
rs2937835	0.86[ASN][1000 genomes]
rs2974454	0.85[ASN][1000 genomes]
rs377667	0.85[CEU][hapmap]
rs381182	0.85[CEU][hapmap]
rs39695	0.85[CEU][hapmap]
rs409465	0.85[CEU][hapmap]
rs432733	0.81[JPT][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60997800-61015200	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr5:61012000-61013200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr5:61012000-61013200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:61012400-61013000	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr5:61012600-61013000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr5:61012600-61013200	Enhancers	H9 Cell Line	embryonic stem cell
7	chr5:61012600-61013200	Enhancers	iPS-20b Cell Line	embryonic stem cell

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