The 2.0 version of rSNPBase

Variant report

Variant rs3000484
Chromosome Location chr13:40320483-40320484
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40255800-40340200 Weak transcription Psoas Muscle Psoas
2 chr13:40267600-40341200 Weak transcription Rectal Smooth Muscle rectum
3 chr13:40274600-40327000 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr13:40286200-40332200 Weak transcription Esophagus oesophagus
5 chr13:40290600-40328600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr13:40293000-40340800 Weak transcription Colon Smooth Muscle Colon
7 chr13:40293600-40329000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr13:40294200-40339200 Weak transcription Fetal Brain Male brain
9 chr13:40294600-40327800 Weak transcription NH-A brain
10 chr13:40297600-40339800 Weak transcription Brain Hippocampus Middle brain
11 chr13:40297800-40329800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr13:40299200-40327600 Weak transcription Fetal Heart heart
13 chr13:40302000-40328800 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr13:40304000-40328800 Weak transcription Dnd41 blood
15 chr13:40304600-40340000 Weak transcription Osteobl bone
16 chr13:40306400-40327400 Weak transcription HUVEC blood vessel
17 chr13:40306600-40325200 Weak transcription Primary B cells from peripheral blood blood
18 chr13:40307600-40329400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr13:40309200-40331400 Weak transcription Stomach Mucosa stomach
20 chr13:40309200-40334600 Weak transcription HepG2 liver
21 chr13:40311400-40324000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr13:40311400-40347200 Weak transcription HSMM muscle
23 chr13:40311600-40324200 Weak transcription Adipose Nuclei Adipose
24 chr13:40311600-40326600 Weak transcription Placenta Placenta
25 chr13:40311600-40329400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr13:40311600-40331200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr13:40311600-40339800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr13:40311600-40340000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr13:40311800-40331000 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr13:40311800-40339800 Weak transcription Brain Anterior Caudate brain
31 chr13:40311800-40340000 Weak transcription Ovary ovary
32 chr13:40312000-40325800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr13:40312000-40340000 Weak transcription Brain Angular Gyrus brain
34 chr13:40312200-40325600 Weak transcription Liver Liver
35 chr13:40312200-40325800 Weak transcription Placenta Amnion Placenta Amnion
36 chr13:40312200-40326000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr13:40312200-40327000 Weak transcription Primary T cells from cord blood blood
38 chr13:40312200-40327000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr13:40312200-40327400 Weak transcription Stomach Smooth Muscle stomach
40 chr13:40312200-40329000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr13:40312200-40329800 Weak transcription Aorta Aorta
42 chr13:40312200-40331800 Weak transcription Left Ventricle heart
43 chr13:40312200-40333000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr13:40312200-40340000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr13:40312200-40340000 Weak transcription Pancreas Pancrea
46 chr13:40312200-40340200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr13:40312200-40351200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr13:40312400-40325000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr13:40312400-40325000 Weak transcription Primary T cells fromperipheralblood blood
50 chr13:40312400-40325400 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015