The 2.0 version of rSNPBase

Variant report

Variant rs3012150
Chromosome Location chr13:40330462-40330463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40255800-40340200 Weak transcription Psoas Muscle Psoas
2 chr13:40267600-40341200 Weak transcription Rectal Smooth Muscle rectum
3 chr13:40286200-40332200 Weak transcription Esophagus oesophagus
4 chr13:40293000-40340800 Weak transcription Colon Smooth Muscle Colon
5 chr13:40294200-40339200 Weak transcription Fetal Brain Male brain
6 chr13:40297600-40339800 Weak transcription Brain Hippocampus Middle brain
7 chr13:40304600-40340000 Weak transcription Osteobl bone
8 chr13:40309200-40331400 Weak transcription Stomach Mucosa stomach
9 chr13:40309200-40334600 Weak transcription HepG2 liver
10 chr13:40311400-40347200 Weak transcription HSMM muscle
11 chr13:40311600-40331200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr13:40311600-40339800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr13:40311600-40340000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr13:40311800-40331000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr13:40311800-40339800 Weak transcription Brain Anterior Caudate brain
16 chr13:40311800-40340000 Weak transcription Ovary ovary
17 chr13:40312000-40340000 Weak transcription Brain Angular Gyrus brain
18 chr13:40312200-40331800 Weak transcription Left Ventricle heart
19 chr13:40312200-40333000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr13:40312200-40340000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr13:40312200-40340000 Weak transcription Pancreas Pancrea
22 chr13:40312200-40340200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr13:40312200-40351200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr13:40314600-40331400 Weak transcription Primary B cells from cord blood blood
25 chr13:40315000-40340200 Weak transcription Muscle Satellite Cultured Cells --
26 chr13:40315200-40330600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr13:40325200-40334400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr13:40325800-40339800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr13:40326200-40331400 Weak transcription Fetal Muscle Trunk muscle
30 chr13:40326200-40339400 Weak transcription Adipose Nuclei Adipose
31 chr13:40326400-40334400 Weak transcription Liver Liver
32 chr13:40327200-40331800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr13:40327400-40344400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr13:40327400-40352200 Weak transcription Primary T cells from cord blood blood
35 chr13:40327600-40334800 Weak transcription Primary T cells fromperipheralblood blood
36 chr13:40327800-40339400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr13:40327800-40347400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr13:40328600-40335000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr13:40329800-40330600 Strong transcription Fetal Intestine Large intestine
40 chr13:40330000-40332000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr13:40330000-40345200 Weak transcription Aorta Aorta
42 chr13:40330200-40340000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:40330400-40339800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015