The 2.0 version of rSNPBase

Variant report

Variant rs9532421
Chromosome Location chr13:40298805-40298806
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40255000-40306000 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr13:40255800-40340200 Weak transcription Psoas Muscle Psoas
3 chr13:40257600-40310800 Weak transcription Brain Germinal Matrix brain
4 chr13:40262800-40311000 Weak transcription Aorta Aorta
5 chr13:40262800-40311000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr13:40263200-40302600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr13:40267600-40341200 Weak transcription Rectal Smooth Muscle rectum
8 chr13:40274000-40301600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr13:40274600-40327000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr13:40282400-40310800 Weak transcription Right Ventricle heart
11 chr13:40283600-40310400 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr13:40283600-40311000 Weak transcription Gastric stomach
13 chr13:40284200-40310400 Weak transcription Fetal Stomach stomach
14 chr13:40284400-40302200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr13:40285200-40317600 Weak transcription Small Intestine intestine
16 chr13:40286200-40332200 Weak transcription Esophagus oesophagus
17 chr13:40287000-40303000 Weak transcription NHLF lung
18 chr13:40287400-40311000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr13:40287400-40311400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr13:40287400-40313000 Weak transcription NHEK skin
21 chr13:40287600-40310800 Weak transcription HSMMtube muscle
22 chr13:40290200-40311000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr13:40290600-40328600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr13:40290800-40299200 Strong transcription Fetal Lung lung
25 chr13:40291400-40310800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr13:40292000-40302800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr13:40292000-40302800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr13:40292000-40302800 Weak transcription Fetal Intestine Small intestine
29 chr13:40292000-40310400 Weak transcription Fetal Brain Female brain
30 chr13:40292000-40313400 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr13:40292200-40300200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr13:40292200-40311400 Weak transcription Fetal Thymus thymus
33 chr13:40292400-40300400 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr13:40292400-40300400 Weak transcription Stomach Smooth Muscle stomach
35 chr13:40292400-40314800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr13:40292600-40310600 Weak transcription Fetal Muscle Trunk muscle
37 chr13:40292600-40310800 Weak transcription Fetal Muscle Leg muscle
38 chr13:40292800-40303400 Strong transcription Liver Liver
39 chr13:40292800-40307200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr13:40293000-40301000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr13:40293000-40340800 Weak transcription Colon Smooth Muscle Colon
42 chr13:40293400-40312600 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr13:40293600-40329000 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr13:40294200-40300200 Weak transcription NHDF-Ad bronchial
45 chr13:40294200-40303000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr13:40294200-40305000 Weak transcription Left Ventricle heart
47 chr13:40294200-40339200 Weak transcription Fetal Brain Male brain
48 chr13:40294400-40300600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr13:40294400-40301800 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr13:40294400-40304000 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015