Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:26133253..26135370-chr10:26139828..26141918,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10764586	0.94[ASN][1000 genomes]
rs10828887	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10828892	0.94[ASN][1000 genomes]
rs11014762	0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs11014784	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1123383	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16926362	0.85[ASN][1000 genomes]
rs2255495	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2437384	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2437386	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2437392	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2437394	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2437395	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2437396	0.89[ASN][1000 genomes]
rs2505431	0.85[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2505438	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2505440	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2917186	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3006253	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7073148	0.91[ASN][1000 genomes]
rs7089832	0.91[ASN][1000 genomes]
rs751006	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs751007	1.00[JPT][hapmap];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894974	chr10:26028530-26322783	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1051756	chr10:26092320-26277478	Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv3411313	chr10:26139815-26143622	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3482285	chr10:26139862-26143599	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3323523	chr10:26139880-26143583	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3482396	chr10:26139901-26143556	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3482507	chr10:26139901-26143556	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv11326	chr10:26139994-26143360	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26138000-26141400	Enhancers	Brain Germinal Matrix	brain
2	chr10:26138000-26142200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr10:26138600-26141600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr10:26138800-26141600	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr10:26138800-26141800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr10:26138800-26142000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr10:26138800-26142000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr10:26140400-26141400	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr10:26140400-26142000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr10:26140600-26141600	Enhancers	H1 Cell Line	embryonic stem cell
11	chr10:26140600-26141800	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr10:26140600-26141800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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