Variant report

Variant rs3136693
Chromosome Location chr17:38709293-38709294
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38699400-38710200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr17:38699600-38709800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr17:38702000-38710200 Weak transcription Gastric stomach
4 chr17:38702200-38710000 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr17:38702400-38710000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr17:38703000-38709600 Enhancers Primary B cells from cord blood blood
7 chr17:38703200-38714400 Enhancers Lung lung
8 chr17:38703200-38716800 Enhancers Fetal Muscle Leg muscle
9 chr17:38703400-38711000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr17:38703400-38711200 Enhancers Fetal Stomach stomach
11 chr17:38703400-38712000 Enhancers Esophagus oesophagus
12 chr17:38703400-38712400 Enhancers Left Ventricle heart
13 chr17:38703400-38713400 Enhancers Fetal Muscle Trunk muscle
14 chr17:38703600-38711800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr17:38703600-38717200 Enhancers Placenta Placenta
16 chr17:38703800-38709600 Enhancers Adipose Nuclei Adipose
17 chr17:38703800-38710200 Enhancers Right Atrium heart
18 chr17:38703800-38710200 Enhancers NHLF lung
19 chr17:38703800-38711000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr17:38703800-38711600 Enhancers Colon Smooth Muscle Colon
21 chr17:38704200-38709400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr17:38704200-38709600 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr17:38704200-38709800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr17:38704200-38713000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr17:38704200-38713200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr17:38704400-38709400 Enhancers Primary T helper cells PMA-I stimulated --
27 chr17:38704600-38711200 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr17:38705000-38709600 Enhancers Dnd41 blood
29 chr17:38705000-38711000 Enhancers Fetal Lung lung
30 chr17:38705000-38711200 Enhancers Colonic Mucosa Colon
31 chr17:38705200-38712000 Enhancers Ovary ovary
32 chr17:38706000-38709400 Weak transcription Fetal Intestine Large intestine
33 chr17:38706000-38709600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr17:38706000-38709800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr17:38706000-38710200 Weak transcription Pancreas Pancrea
36 chr17:38706200-38709400 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr17:38706200-38709800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr17:38706200-38710200 Weak transcription Stomach Mucosa stomach
39 chr17:38706400-38710000 Weak transcription HMEC breast
40 chr17:38706400-38711600 Enhancers Fetal Heart heart
41 chr17:38706800-38711000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
42 chr17:38707200-38709600 Weak transcription GM12878-XiMat blood
43 chr17:38707200-38710400 Genic enhancers Primary T cells from cord blood blood
44 chr17:38707800-38709800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr17:38707800-38709800 Genic enhancers Thymus Thymus
46 chr17:38707800-38710000 Enhancers Brain Angular Gyrus brain
47 chr17:38708000-38710000 Genic enhancers Primary T helper cells fromperipheralblood blood
48 chr17:38708000-38710200 Genic enhancers Primary T helper naive cells from peripheral blood blood
49 chr17:38708000-38711200 Enhancers Rectal Mucosa Donor 31 rectum
50 chr17:38708000-38711600 Genic enhancers Primary T regulatory cells fromperipheralblood blood

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