The 2.0 version of rSNPBase

Variant report

Variant rs73983088
Chromosome Location chr17:38701719-38701720
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38693400-38701800 Weak transcription Gastric stomach
2 chr17:38698000-38708400 Enhancers Fetal Thymus thymus
3 chr17:38698200-38708200 Enhancers Primary T cells fromperipheralblood blood
4 chr17:38698400-38703600 Enhancers Primary T killer memory cells from peripheral blood blood
5 chr17:38698400-38704800 Weak transcription H9 Cell Line embryonic stem cell
6 chr17:38698800-38703600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr17:38699000-38702200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr17:38699200-38703400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr17:38699200-38703600 Weak transcription Brain Cingulate Gyrus brain
10 chr17:38699200-38703800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr17:38699400-38703200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr17:38699400-38703600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr17:38699400-38703800 Weak transcription Brain Hippocampus Middle brain
14 chr17:38699400-38710200 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr17:38699600-38703400 Weak transcription Primary hematopoietic stem cells blood
16 chr17:38699600-38703400 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr17:38699600-38703400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr17:38699600-38703400 Weak transcription Fetal Brain Female brain
19 chr17:38699600-38703800 Weak transcription Brain Substantia Nigra brain
20 chr17:38699600-38704800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr17:38699600-38707800 Weak transcription Brain Angular Gyrus brain
22 chr17:38699600-38709800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr17:38699800-38703400 Weak transcription Muscle Satellite Cultured Cells --
24 chr17:38699800-38703800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr17:38699800-38703800 Weak transcription Stomach Mucosa stomach
26 chr17:38699800-38704000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr17:38699800-38704000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr17:38699800-38704800 Weak transcription Fetal Intestine Large intestine
29 chr17:38699800-38705000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr17:38699800-38705000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr17:38699800-38705000 Weak transcription Brain Anterior Caudate brain
32 chr17:38700000-38701800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr17:38700000-38701800 Weak transcription Lung lung
34 chr17:38700000-38702000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr17:38700000-38703200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr17:38700000-38703200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr17:38700000-38703200 Weak transcription Brain Germinal Matrix brain
38 chr17:38700000-38703400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr17:38700000-38703400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr17:38700000-38703400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr17:38700000-38703400 Weak transcription Esophagus oesophagus
42 chr17:38700000-38703400 Weak transcription Fetal Brain Male brain
43 chr17:38700000-38703600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr17:38700000-38703600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr17:38700000-38703800 Weak transcription H1 Cell Line embryonic stem cell
46 chr17:38700000-38703800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr17:38700000-38703800 Weak transcription NH-A brain
48 chr17:38700000-38704000 Weak transcription Fetal Intestine Small intestine
49 chr17:38700000-38704000 Weak transcription Small Intestine intestine
50 chr17:38700000-38705000 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015