The 2.0 version of rSNPBase

Variant report

Variant rs11657772
Chromosome Location chr17:38684685-38684686
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38675600-38686600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr17:38677600-38687800 Weak transcription Right Ventricle heart
3 chr17:38678000-38686800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr17:38678200-38685200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr17:38678800-38686800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr17:38679200-38686600 Weak transcription Muscle Satellite Cultured Cells --
7 chr17:38679200-38686800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr17:38680000-38685600 Weak transcription Hela-S3 cervix
9 chr17:38680800-38686400 Weak transcription Placenta Amnion Placenta Amnion
10 chr17:38681000-38686800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr17:38681200-38686600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr17:38681200-38688600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr17:38682000-38686800 Weak transcription Primary B cells from cord blood blood
14 chr17:38682600-38686800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr17:38682600-38689000 Weak transcription HepG2 liver
16 chr17:38682800-38686800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr17:38683000-38686600 Weak transcription HMEC breast
18 chr17:38683200-38686600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr17:38683200-38686600 Weak transcription Esophagus oesophagus
20 chr17:38683200-38688400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr17:38683200-38688600 Weak transcription NHDF-Ad bronchial
22 chr17:38683200-38688800 Weak transcription Spleen Spleen
23 chr17:38683200-38689200 Weak transcription Left Ventricle heart
24 chr17:38683400-38684800 Weak transcription A549 lung
25 chr17:38683400-38686600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr17:38683600-38690000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr17:38683800-38685800 Weak transcription Placenta Placenta
28 chr17:38683800-38686600 Enhancers NHEK skin
29 chr17:38683800-38691000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr17:38683800-38691200 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr17:38684200-38686000 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr17:38684200-38688400 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr17:38684200-38689200 Enhancers Primary T helper cells PMA-I stimulated --
34 chr17:38684200-38689200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr17:38684200-38691200 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr17:38684200-38691200 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr17:38684200-38691400 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr17:38684200-38697000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr17:38684400-38686800 Enhancers Primary T cells fromperipheralblood blood
40 chr17:38684400-38687800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr17:38684600-38689600 Enhancers Primary T cells from cord blood blood

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Last update: Aug 31, 2015