Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21665558..21668066-chr10:21668270..21670229,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10218879	0.91[EUR][1000 genomes]
rs10218952	0.91[EUR][1000 genomes]
rs10218971	0.91[EUR][1000 genomes]
rs10218986	0.91[EUR][1000 genomes]
rs11012665	0.91[EUR][1000 genomes]
rs11012673	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12248522	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12250778	0.92[EUR][1000 genomes]
rs12256314	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16921744	0.91[EUR][1000 genomes]
rs16921779	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16921789	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs2360046	0.91[EUR][1000 genomes]
rs34299719	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34891645	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55782349	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58722636	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs60360051	0.88[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs61849963	1.00[ASN][1000 genomes]
rs61849964	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61849974	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61849975	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs61849976	0.88[AMR][1000 genomes]
rs7080191	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7907491	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv831807	chr10:21509185-21688043	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21654000-21676800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:21654200-21681400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr10:21666200-21672200	Weak transcription	A549	lung
4	chr10:21668800-21674400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr10:21669200-21670200	Enhancers	Primary T cells from cord blood	blood

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