Variant report

Variant rs34110102
Chromosome Location chr13:53619184-53619185
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:53601200-53620000 Weak transcription Spleen Spleen
2 chr13:53609000-53626400 Weak transcription Small Intestine intestine
3 chr13:53610800-53628800 Strong transcription Primary neutrophils fromperipheralblood blood
4 chr13:53615000-53619200 Weak transcription Adipose Nuclei Adipose
5 chr13:53616000-53620600 Enhancers Fetal Muscle Leg muscle
6 chr13:53616600-53620600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr13:53616800-53621400 Enhancers Fetal Stomach stomach
8 chr13:53617000-53619400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr13:53617000-53619400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr13:53617200-53619400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr13:53617400-53619800 Weak transcription Colon Smooth Muscle Colon
12 chr13:53617400-53621800 Genic enhancers Duodenum Mucosa Duodenum
13 chr13:53617600-53619800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr13:53617600-53620200 Enhancers Duodenum Smooth Muscle Duodenum
15 chr13:53617800-53620800 Enhancers Fetal Kidney kidney
16 chr13:53618000-53619600 Enhancers Stomach Mucosa stomach
17 chr13:53618000-53624200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr13:53618400-53619200 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr13:53618600-53620600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr13:53618800-53619200 Enhancers Brain Germinal Matrix brain
21 chr13:53618800-53620000 Enhancers Fetal Lung lung
22 chr13:53619000-53619200 Enhancers Gastric stomach
23 chr13:53619000-53619400 Enhancers Pancreas Pancrea
24 chr13:53619000-53620200 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr13:53619000-53620200 Enhancers Rectal Mucosa Donor 31 rectum
26 chr13:53619000-53620200 Enhancers Rectal Smooth Muscle rectum

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